KEGG   Manduca sexta (tobacco hornworm): 115453992
Entry
115453992         CDS       T07401                                 
Name
(RefSeq) LOW QUALITY PROTEIN: hypoxia-inducible factor 1-alpha
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex04137  Mitophagy - animal
msex04140  Autophagy - animal
msex04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:msex00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    115453992
   04137 Mitophagy - animal
    115453992
   04148 Efferocytosis
    115453992
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:msex03000]
    115453992
Transcription factors [BR:msex03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    115453992
SSDB
Motif
Pfam: PAS_3 PAS PAS_11 bHLH_HIF1A PAS_9 PAS_4 HLH
Other DBs
NCBI-GeneID: 115453992
NCBI-ProteinID: XP_037293950
Position
13:complement(836050..926423)
AA seq 970 aa
MLVNGYGEQYADQCSVGGHFEEAGWNVQCQLNQQWGHQSVNNVCSFGAYGPEYPGQYYRS
VPYQYGVPPPYNPPKVYPRQVAYVQQPIVPNLPCHQAQQWDYNSMCFNVDGQACQYTNVV
DLEDFMNNEKRKEKSRVAARCRRTKEMQIFSELTAALPAKKEEVEQLDKASVMRLAISYL
RARDVVSMLPDVDKEQPKVQNPKGYEELSSELSYMKALDGFVMVLSQQGDIVYCSENIAD
HLGVSQMEIMGQSVFEFSHLCDHEEIREALRPNGGGRRDLLLRLKCTLTSKGRNVHLKSA
SYKVIHITGHMLMPTNGKERNNNKEDKKIDDDKKASGASLVAVGRPIPHPSNIEIPLDSK
TFLSKHSLDMKFTYVDEALLNTLGFEPDELVGRSLYDYHHAADSASMIQQFKSLFSKGQC
ETGQYRFLAKASGYAWVQTQATVITDKQQKPISVVCVNYVISGIECKDEVFAAHQVQHAD
LKPPVAVTAPVPAPAPLCAPVAPPANGAIVAAVPSDDERPIPVTELIFAPRKKEMNKGFL
MFSQDEEGLTMLKDEPEDLTHLAPTAGDACIPLENSPFDMFDDFILSDNYCSLLGDELAN
ASPVDSLTPDSLLLSSPEPQENESSCEQSSLLTELSLDAFDGTRSDNDIDDGNSPFIPTS
DELPVLEPAVMWGALPDSVSLAXPQPTETHNASPAPALQRLLTASTTGPPPQDLITNIYS
DQGLIPSRSVASWDTGVKRVLKQEQEPCAKRAKRSPSPAPARASSKPSSSVLMNLLDTPQ
PSPQSQHNMHTNYQMIQNAQALGGQAMNRNSIQIPVINIVPTINNQISRTNTPINQVIRT
SMASPMSPLSLSIGSPMYSLPPSPSSYNSPAMSPAQRDRMMSPYSSSPSLSPMGKYQVYS
PGRLMSPAGVIQGCDPYLTTKMQPSPGFPMQTEMLLDSNVPLTTSDFWPDTDMLQGTSDL
LTAFDDVKLG
NT seq 2913 nt   +upstreamnt  +downstreamnt
atgctcgtgaacgggtacggggagcaatatgctgaccagtgttccgtcggaggacacttc
gaggaggccggatggaatgtgcagtgtcagttgaaccaacagtggggacatcaatccgtc
aataatgtgtgcagtttcggtgcttacggtccggaataccccggacaatattataggagt
gttccgtaccagtatggtgtacctcctccgtataatcctccgaaggtgtatcctcgtcag
gtcgcctatgtacagcagcctattgttccaaacttaccctgtcatcaagctcagcaatgg
gactataatagtatgtgcttcaatgtggatggacaggcttgtcaatacacaaatgttgtt
gacttagaagattttatgaataatgagaaacggaaggagaaatcgcgtgtggctgcgcga
tgtcgtcgcaccaaggagatgcagatcttctcggagctcaccgccgccctcccggccaag
aaggaggaggtggaacaactggacaaggcctccgtgatgcgtctagctatatcctacctt
cgcgcccgggatgtcgtctccatgcttcctgatgttgacaaagagcagcccaaagtgcag
aatccgaaaggatatgaggagttgtcttcagaactatcgtacatgaaagccttggatgga
ttcgtcatggtgctttcacagcagggcgacatagtgtactgcagcgagaacattgccgac
catctgggcgtgtcacagatggagataatgggccagagcgtgttcgagttcagccatctg
tgtgatcacgaggagatccgtgaggcgctgcgccccaatggcggcggacgccgtgatctg
ctgctacgtctcaagtgcaccctcaccagcaagggacggaacgtgcatctcaagtcggct
tcttataaggtgattcacatcaccggtcacatgctgatgccgaccaacggaaaggagcgc
aacaacaacaaggaagataagaaaatcgacgacgataagaaagcgagcggcgcctctctt
gttgccgtcggtcggccgataccgcacccctccaacatcgaaataccgctggacagcaag
accttcctctccaaacacagcttggacatgaagttcacttatgtggacgaggctttgctg
aatactctcggattcgaaccagacgagctggtcggcagatcgctttacgattaccaccat
gcagccgacagtgcttctatgattcagcagttcaagtctctgttctcaaagggacaatgc
gagaccggccaatatcgcttcctggccaaggctagtggctacgcctgggtccaaacccag
gccaccgtcatcaccgacaagcaacagaagccaatcagcgtcgtgtgcgtcaactacgtc
atcagcggtatcgagtgcaaagatgaggtgttcgcagcacaccaagtgcagcacgccgat
ctgaagcccccggtggcagtgactgcacccgtacccgcgcccgcgccgctctgtgcgcct
gtcgcgccgcctgccaacggcgcaatagtcgccgccgtaccctccgacgacgagcgacct
atacccgtcacagagctcattttcgcaccgcgaaagaaagaaatgaataaaggctttctc
atgttctcccaagacgaggagggacttacaatgcttaaagacgagccggaagatctgacc
catttggcacctacggctggtgacgcttgtatccctctggagaacagcccgtttgacatg
ttcgatgattttatactaagcgacaattactgtagccttttgggtgatgaattggctaat
gcgtcaccggtagactctctaactcctgattcgttgttattatcttcgcccgaacctcag
gagaatgaatcgtcatgtgaacaatcatcgttattaacagaactgtcgttggacgcgttt
gacggcacgaggtcggataatgatattgacgatggaaactcgccgttcataccgacgagc
gacgagctgccggtgctggagccggcggtgatgtggggcgcgctgcccgacagcgtcagt
ctggctncgccccagcccacggagacacacaatgcctccccagcaccggcgctacagcgc
ttgctcactgcgtcgaccacaggcccgccgccacaggatctcattaccaatatatattca
gatcaaggtctcataccgagcagaagcgttgcgtcttgggatacgggtgtgaaaagagta
ttgaagcaagagcaggagccgtgcgcgaagcgtgctaagcgcagcccgtccccggcgccg
gctagagcgagtagcaagccctcgtcgagcgtcctcatgaatctgctggatacgccacaa
ccgtcaccccagagtcaacataatatgcacaccaattaccagatgatacaaaatgcacag
gcattaggaggccaagccatgaacagaaacagcatccagatacctgtaataaacatcgtt
ccgaccataaacaatcaaatatcgcgtaccaacacacctatcaatcaagttatacgcaca
agcatggccagcccgatgtctcctttaagcctgagtatcggcagtccgatgtattcgctc
ccgcccagcccgagcagttacaacagtcccgccatgagtcctgctcagagagaccgcatg
atgagtccgtattcctcttcgccatcgctgtccccgatgggtaagtaccaagtgtacagt
ccagggaggttgatgtcgccggcgggcgtgatccagggctgcgatccgtacctcacgacc
aagatgcaacccagcccggggttcccgatgcaaacagaaatgctcctggattcgaacgtg
ccgctgaccacgtccgacttctggccggacacggacatgctccaaggaacaagcgactta
ctaacggctttcgatgacgtcaaactaggctag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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