KEGG   Malus sylvestris (European crab apple): 126590932
Entry
126590932         CDS       T09027                                 
Name
(RefSeq) AP-2 complex subunit alpha-1-like
  KO
K11824  AP-2 complex subunit alpha
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl04142  Lysosome biogenesis
msyl04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    126590932
   04142 Lysosome biogenesis
    126590932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:msyl04131]
    126590932
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msyl04147]
    126590932
Membrane trafficking [BR:msyl04131]
 Endocytosis
  Clathrin-mediated endocytosis
   AP-2 complex
    126590932
Exosome [BR:msyl04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   126590932
SSDB
Motif
Pfam: Adaptin_N Alpha_adaptin_C Alpha_adaptinC2 Cnd1 HEAT_2 SPT2
Other DBs
NCBI-GeneID: 126590932
NCBI-ProteinID: XP_050112406
Position
11:14200283..14212674
AA seq 1020 aa
MALSGMRGLSVFISDVRNCPNKEQERLRVDKELGNVRTRFKNEKGLTPYEKKKYVWKMLY
IYMLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTACLLNENHDFLRLAINTVRNDIIGRN
ETFQCLALTMVGNIGGREFAESLAPDVQKLLISSSYRPLVRKKAALCLLRLYRKNPDVVN
VDGWADRMAQLLDERDLGVLTSSMSLLVALVSNHYDAYWSCLPKCVKILERLARNQDIPQ
EYTYYGIPSPWLQVKTMRALQYFPTVEDPNTRRSLFEVLQRILMGTDVVKNVNKNNASHA
VLFEALALVMHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKR
HQAQIITSLKDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTADFAMREELSLKAA
ILAEKFAPDLSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQPYAAAKAREYLDK
PAIHETMVKVSAYIIGEFGHLLARRPGCSPKELFTVIHEKLPAVTTSTIPILLSTYAKIF
MHTQPPDQELQNQIWSIFNKYESCIDVEIQQRAAEYLALSRRGADLVDILAEMPKFPERQ
SALIKKAEDTEVDTAEQSAIKLRAQQQTSSALVVTDQRPANGTPPVNQLGLVKMPSMSSN
ADHNSTDQGLSQENGTLSKVDPQPPSADLLGDLLGPLAIEGRPATAGQQQQTVTPGLGSD
PNAVDASAIVPVGEEQNSVQPIGNIAERFHALCLKDSGVLYEDPNIQIGVKSEWRLHQGF
LVLFLGNKNTSPLVSVQAIILPPSHLKMELSLVPDTIPPRAQVQCPLEVVNLRPSRDVAV
LDFSYKFGNNMVNVKLRLPAVLSKFLQPIPVSTEEFFPQWRSLLGPPLKLQEVVRGVKPM
PLVEMANLLNSFRLMVCPALDPNPNNLVASTTFYSENTRAMLCLVRIETDPADRTQLRMT
VASGDPTLTLELKEFIKEQLVFMPPAPHAPGPVPPAPPVAQPTSPVAALTDPGAMLAGLL
NT seq 3063 nt   +upstreamnt  +downstreamnt
atggcgttgtcaggcatgcgaggcctctctgttttcatcagcgacgttcggaattgcccg
aacaaagagcaggagaggctccgggtcgataaggagcttgggaatgtccgtacacgcttc
aaaaacgaaaagggtttaacaccttatgaaaagaagaaatatgtctggaaaatgctttac
atttatatgctgggctacgatgtggattttgggcacatggaagcagtttctctaatatct
gcgcctaagtatccagaaaagcaggttgggtacattgtaacagcatgcttgctcaatgag
aaccatgattttctgagattagcgataaatactgtgcgcaatgacatcattggtcggaat
gagactttccaatgtttggcgttgactatggttgggaatattggtgggcgagaatttgcg
gagtcattagcacctgatgttcaaaagttacttatttctagcagctacagaccacttgtg
agaaaaaaagctgcactatgtctattgcgcttgtatagaaaaaatcctgatgttgtcaat
gtcgatggctgggctgaccggatggcacaacttttagatgaacgtgatcttggtgtttta
acatcgtctatgagccttcttgttgcccttgtatcaaaccactatgatgcttactggagt
tgtcttccaaaatgcgttaaaatattagaacgactagctaggaaccaggatattccacaa
gagtacacctactatgggatcccatctccctggcttcaggtcaagacaatgagggctctt
cagtattttccaaccgtcgaagatccaaataccagaagatcattatttgaggtcttacag
cggattttgatgggtactgatgttgtgaaaaatgttaataagaacaatgcatcacatgct
gttctctttgaagccctcgctttagtcatgcatcttgatgctgaaaaggagatgatgtct
cagtgtgttgcccttcttggaaaatttattgctgtccgtgaaccaaatatccgatatctt
ggtttggaaaatatgacccgcatgttaatggttactgatgtgcaagatatcatcaagaga
catcaggctcagatcatcacctcattgaaggatccagatatcagtatacgtaggcgtgct
cttgacttgctttatggtatgtgtgatgtttcaaatgcaaaggatatagtcgaagaatta
ttgcagtatcttagcacagcagattttgccatgcgtgaagaattgtctcttaaggctgcc
attcttgcagaaaagtttgcccctgatctttcttggtatgtagatgtgattcttcaatta
attgacaaggctggagattttgttagtgacgatatatggtttcgtgttgtgcaatttgtt
acaaataacgaagacttacagccttatgcagcagcaaaagctagggagtatcttgacaaa
cctgctatacatgagactatggttaaggtcagtgcatatatcattggagaatttggccac
cttttggccagacggcctgggtgcagtccgaaggaattatttaccgtcatacatgagaag
cttcctgctgtaacgacatctactatacctattcttctttcaacatatgctaagatcttt
atgcacactcagcctccagaccaggaactacagaatcagatctggtcaatattcaacaaa
tatgagagttgcattgatgttgagatacaacaaagagctgctgaataccttgccttaagt
aggagaggtgcagatctggtggatattttggctgaaatgcctaaatttcctgagcggcag
tctgcattgatcaagaaggctgaagatacagaggttgatacagcagaacaaagtgctatc
aagttgcgggcccagcagcaaacatcaagtgctttggttgtgaccgatcaacgccctgct
aacgggaccccgcctgtcaaccagctcggtcttgtcaagatgcccagcatgagcagtaac
gcggatcacaattcaactgaccaagggttgtctcaggaaaatggtactttgagtaaagtt
gatcctcagccaccttcagcagatctccttggtgatctcttgggtcccctggctattgaa
ggccgtcctgctactgctggtcagcaacagcagactgtaacccctggattaggaagcgat
ccaaatgcagtggatgcttcagcaattgtgcctgttggcgaggagcaaaattctgttcag
ccaataggaaatattgctgaaagatttcatgctctctgcttgaaagatagtggtgttcta
tacgaagatcctaatattcagattggagttaaatccgagtggcggctacatcaaggattt
cttgttcttttcttgggaaacaaaaatacttcaccacttgtgtcagttcaggctataata
ttgcctccctctcatttgaaaatggagctctcactagtaccggatactattcctcccagg
gcacaggtacaatgcccacttgaagttgtgaatctcagacctagcagggatgtagcggtt
cttgacttttcctacaagtttggtaacaatatggtcaatgtcaaacttcgcctcccagct
gtcttaagtaaatttcttcagcccattccggtgtctactgaagagttctttcctcagtgg
agatcactattggggccacctctgaagcttcaagaagtggttagaggtgtcaaaccaatg
ccacttgtagaaatggcgaatctacttaacagtttccggttgatggtttgtccagcgctt
gatccaaatccaaataatcttgttgcaagtacaacgttttactcagaaaatacacgggcc
atgctttgcttggttagaatagaaacagatccagcagacagaacacagttgcgtatgaca
gttgcttcaggggaccctacattaacgcttgagttgaaggagttcatcaaggaacaatta
gttttcatgcctccagcccctcatgcacctggaccagtgccgccagcacccccagtagct
caaccgaccagcccggttgcagcattaacggatcccggggctatgctggccggcctgctg
tga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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