KEGG   Medicago truncatula (barrel medic): 11426017
Entry
11426017          CDS       T01716                                 
Name
(RefSeq) probable ribosomal RNA small subunit methyltransferase B
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
mtr  Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mtr03009]
    11426017
Enzymes [BR:mtr01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     11426017
Ribosome biogenesis [BR:mtr03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    11426017
SSDB
Motif
Pfam: Methyltr_RsmB-F NusB RsmF-B_ferredox FtsJ TRM5-TYW2_MTfase Methyltransf_15 Methyltransf_25 Methyltransf_31 Ubie_methyltran
Other DBs
NCBI-GeneID: 11426017
NCBI-ProteinID: XP_003617839
UniProt: G7KEH7
Position
5:complement(43167665..43174836)
AA seq 529 aa
MAKVVYMGVPFLTQPHKTTITSSKPFKLSHRTHSTNISILSSTNNGSANRSVKPQKLNSD
ISPHRAVSAVRLMRIELGGAFADLLNEKGKGSGENEMGYVQRTLGFRTRELNNQDLRLVT
EIVGGTIRWRRYLDHLISSLCHDKDISSMEPLLLQILRIGFYEIVKLDMPPYAVVDENVQ
LAKAALRPGAGNMVNGVLRKLVVLKENETLPLPKVEGDDRSQARALATLYSHPVWIVRRW
TKYLGQEEAIKLMIWNNIEPSYSLRANRAKGFSRDDLVTELNALKVPHKLSLHLDDFVRI
KTGLQIIIHAGLFKEGLCSVQDESAGLIVSIVDPQPGETIVDCCAAPGGKTLYMAAHLSG
QGMVYAVDVNSGRLRILKETAKLHQVDGVVTTVHADLRTLTDGEPLKSNKVLLDAPCSGL
GVLSKRADLRWNRKLEDMEQLKKLQDELLDAASTLVKPGGVLVYSTCSIDPEENDDRVAA
FLERHADFHIDPVDRYVPPDFVTPKGFYSSNPVKHSLDGSFAARLVRTL
NT seq 1590 nt   +upstreamnt  +downstreamnt
atggcgaaagtggtgtacatgggagttcctttcctcacacaaccccacaaaaccaccata
acttcttcaaaaccattcaagctttcccatagaactcacagcaccaatatatctattctc
tcatccaccaacaatggttctgccaatcgttctgttaaaccccagaagcttaattcagat
atttctcctcacagagctgtgtcagctgtgagattgatgaggattgaacttggtggtgct
tttgctgaccttctcaatgagaaaggaaaaggttctggtgaaaatgagatgggatatgtt
caaagaacacttggatttcgcacccgagaattaaataatcaagaccttagattggttaca
gagattgttgggggcacaattcgttggaggagataccttgatcatttaatcagttcattg
tgtcatgataaagatatatccagtatggaacctcttctcttacagattctacgaattggc
ttctatgagatcgtcaaattagatatgccaccttatgctgttgtagatgagaatgtgcag
cttgccaaagcagctctcaggccgggtgctggcaacatggtcaatggagtcctacgaaag
ctagttgtgctcaaggaaaatgaaactcttcctttacccaaagtggagggtgatgatcgt
tctcaagcacgtgcactggcaactctctactcacatccagtttggatcgtaaggaggtgg
acaaagtatcttggccaggaagaagccattaaactgatgatatggaacaacattgaaccg
agttatagcttaagagcaaatcgggcaaagggtttttcaagagatgaccttgtgacagag
cttaatgcattgaaggtcccacacaagctttcattgcatttggatgactttgttcgcatc
aagactgggttgcagattatcattcatgccggcctattcaaagagggtttatgttcagtt
caggatgagagtgcaggtctgatagtttctattgtggatcctcaacctggtgagactatt
gttgattgttgtgctgctcctggtggaaagaccctctacatggccgctcatttaagtgga
caaggtatggtatatgcagttgatgtaaatagtggtaggttgagaattcttaaagagaca
gcaaagttacatcaagtagatggtgtcgttaccactgtccatgccgatcttcgtacatta
actgacggtgaaccacttaagagtaacaaagttttgttggatgcaccatgctcaggactt
ggtgttctttcaaagagagcggacttacgttggaacaggaagttggaggatatggaacaa
ttgaagaaattacaggatgagcttctggatgcagcatccacattggtaaaacccggagga
gtattagtttacagtacatgctccatagatcctgaagagaatgatgatagggtagctgca
tttctagaaagacatgcggattttcacattgatcctgtagacagatacgttccacctgat
tttgtgacaccaaaaggtttctattcatccaacccggtaaaacattcactggatggctcc
tttgcagcccgtttggtacgcacattgtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (14)   

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