KEGG   Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112410399
Entry
112410399         CDS       T08872                                 
Symbol
WIPI1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
  KO
K17908  autophagy-related protein 18
Organism
nasi  Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04136  Autophagy - other
nasi04140  Autophagy - animal
nasi05010  Alzheimer disease
nasi05014  Amyotrophic lateral sclerosis
nasi05016  Huntington disease
nasi05017  Spinocerebellar ataxia
nasi05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:nasi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    112410399 (WIPI1)
   04136 Autophagy - other
    112410399 (WIPI1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    112410399 (WIPI1)
   05014 Amyotrophic lateral sclerosis
    112410399 (WIPI1)
   05016 Huntington disease
    112410399 (WIPI1)
   05017 Spinocerebellar ataxia
    112410399 (WIPI1)
   05022 Pathways of neurodegeneration - multiple diseases
    112410399 (WIPI1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nasi04131]
    112410399 (WIPI1)
   03029 Mitochondrial biogenesis [BR:nasi03029]
    112410399 (WIPI1)
Membrane trafficking [BR:nasi04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    112410399 (WIPI1)
Mitochondrial biogenesis [BR:nasi03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    112410399 (WIPI1)
SSDB
Motif
Pfam: PROPPIN Beta-prop_EML_2 WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_VPS8 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_NWD2_C DUF5711 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N BCAS3_WD40 RMC1_N
Other DBs
NCBI-GeneID: 112410399
NCBI-ProteinID: XP_024616761
UniProt: A0A341CPP7
Position
Unknown
AA seq 447 aa
MEAGAADGPSGGVEEALSCFSFNQDCTSLAIGTKSGYKLFSLSSVEQLDPVHGSNDIPDV
CIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICSYSYSSNVLSIRLNRQRLLVCLEES
IYIHNIKDMKLLKTILDIPPNPTGLCALSINHSNSYVAYPGSRTTGEIVLYDGHALKTVC
TIAAHEGALAAIAFNASGSRLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTISSLAF
SMDSQLLCASSNTETVHIFKLEHLANRQPEEPSTWTSYMGKMLMAATNYLPTQVSDMMNQ
DRAFATGRLGFSGHRNICTLSTIQKLPRLLVASSSGHLYIYNLDPQDGGDCVLIKTHSLL
GSGTADENKENDLRASLPQSYAATVARPSPSAASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGDQKGRTKQSW
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggaggccggggccgcggatggcccctcgggcggggtcgaggaggcgctcagctgcttc
tctttcaaccaggactgcacatccctcgcgattggaaccaaatctggttataagctgttt
tctttgagctccgtggagcagctggaccccgtccacggaagcaatgacatccccgacgtc
tgcatcgtggagcgcctcttctccagcagcctggtggtggtggtgagccacacgaagcct
cgtcagatgaacgtctaccacttcaagaagggcacggagatctgcagctacagctactcc
agtaacgtcttgtccatcaggctgaaccggcagaggctgctcgtttgcctggaggagtcc
atttacattcacaacattaaagacatgaagcttctgaagaccatcctggatattcctcca
aacccgacaggtctgtgtgccctgtccatcaaccattccaattcctacgtggcctatcct
gggagccggacgacaggcgagatcgtgctctacgacggacacgccctgaagacagtctgc
accattgctgcccacgagggggcgctggccgccattgccttcaacgcctcgggctccaga
ctggccagcgcctccgagaaaggcactgtcatccgggtgttctcggttcccgatgggcaa
aagctctatgagtttcggagaggcatgaaaaggtacgtgacaatcagctctctggctttc
agtatggactcgcaactcctctgtgcttcgagcaacacggagaccgtgcacatcttcaag
ctggagcacctcgccaaccgccagccagaggagccctcgacctggaccagctacatggga
aagatgctcatggctgcaaccaactacctccccacccaggtgtccgacatgatgaaccag
gacagggcctttgccaccgggcgcctgggcttctctgggcacaggaacatctgcaccctc
tccacgatccagaagctgccgaggctcctggtggcatcatccagcggacacctttacatc
tacaacttggaccctcaggatggaggagactgcgtcttaatcaagacccacagcttgctt
ggctcaggaactgccgatgagaataaagaaaatgacctcagagcttcattacctcagtct
tacgcagcaactgtggccagaccaagcccttctgcagcctccacggtgccaggttattct
gaggatggcggggcgctccgaggagaggtcatccccgaacacgagtttgcgacgggacca
gtgtgtcttgatgatgagaatgagtttccccctataatcttgtgccgtggcgatcagaag
ggcagaacgaagcagtcatggtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (21)   
   Pfam (21)   
All databases (26)   

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