KEGG   Nicotiana attenuata (coyote tobacco): 109213590
Entry
109213590         CDS       T05870                                 
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
nau  Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:nau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nau03041]
    109213590
Spliceosome [BR:nau03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    109213590
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    109213590
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-GeneID: 109213590
NCBI-ProteinID: XP_019232953
Position
Unknown
AA seq 549 aa
MEMERYSLRREERKREDTSVEYERMSWDALRKSINGLMNKVNAINIKNVIPELXFIRGRG
LFCRYVIKSQIASPIFTDVYAAVVAVVNSKIPIIGDLLMRRIILQLKKPANKPQLLASVK
FIAHLVNQQVVHEIIALQLLTVFLENPTEDSVEVAVSFVTECGSILQDLCPLGLHAIFER
FRDILHEGKIDKRIQFLIENLFALRKAKFQGYPAVRPELDLVELEDQLTHEISLSDKVDS
EIALDVFKPDPNFAENEKKYEVLKKMILGEESEEEEDSDAQSDEEDDEEKTEIKDETETN
LINLLRTIYQTIMSSVDFEEAGHKLMKLRLEPGQEMELCVMLLECCSQERTYLRYYGHLG
QRFCMINKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLAADVLPWHLLAYIRLT
EEDTTSSSRIFIKILFQELAEQLGIRLLNERLNDPTMQQSFESIYPKDNPKNMRFAINFF
TSIGLGGITENLRENLKNMSRPIMQEQKPVSKSGEYESSSSDSESLGSESESGSDGESDD
RRRKRRRRS
NT seq 1650 nt   +upstreamnt  +downstreamnt
atggagatggagagatattcattgaggagagaagagaggaaaagagaagatacatcagtc
gaatacgagaggatgagttgggatgctctcaggaagagtatcaatggattgatgaataag
gtgaacgcaatcaacattaaaaacgttatccctgaattgntttttattcgaggtagaggt
ttattttgcaggtacgtcatcaaatcccaaatcgcttctccaattttcactgacgtctac
gctgctgtcgtcgccgtcgtaaacagcaaaatccctataatcggagatcttttgatgaga
agaattatacttcaactaaaaaaacctgctaataagccacagttattagcatccgtcaag
tttattgctcatctcgtcaatcagcaagtcgttcacgaaattattgctttgcaattactt
acagtttttctggagaatccaactgaagatagtgttgaggttgcagttagttttgttact
gaatgcggttcaattcttcaggatctctgtcccttagggttacacgctatttttgagcgg
tttagagatatacttcatgaaggaaaaatagataaaaggattcagtttttaattgaaaac
ctttttgcattgagaaaagcaaagtttcagggataccctgctgttcgtcctgaacttgac
ttagttgagctggaagatcaattaacacatgaaatctctctctcagataaagtagattca
gaaattgctttagatgtttttaagccggatcctaattttgcagaaaacgaaaaaaaatat
gaagtattaaagaagatgatactaggtgaagaatctgaggaagaagaagattccgatgca
caatcagatgaagaggatgacgaggagaaaacggaaataaaagacgagacagaaacaaac
ttgatcaatcttcttaggacgatttaccagacgattatgtcaagtgttgattttgaagaa
gcagggcataagctaatgaaattaagactagagcctggtcaggagatggaattatgtgta
atgttattggagtgttgcagtcaagagcggacttatctccgttactatgggcatttgggt
cagcgtttttgtatgatcaataaagtttaccaggagaactttgataaatgttttgtgcag
cagtactccatgattcaccgtcttgaaactaataaactgcgcaatgtggctaagttcttc
gctcatttgcttgctgctgatgtgctgccttggcatcttttggcttatataaggttgacg
gaagaggacactacgtcttcttctcgtatatttatcaagattctattccaggagttggca
gagcagcttggcatccgtttattgaatgagcgtcttaatgatcccactatgcagcagtct
tttgagtcaatatatccaaaggataatccgaagaatatgaggtttgctatcaacttcttc
acttccattggtctaggtgggataactgaaaatctgcgagagaatttaaagaacatgtca
agacctatcatgcaggaacaaaagcctgtctctaaatcaggtgaatatgagagttcaagc
tctgattcagaatctttgggttctgaatcagaatcaggtagtgatggtgaaagtgatgat
cgccgaaggaagaggaggagaagaagttag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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