KEGG   Nicotiana attenuata (coyote tobacco): 109226666
Entry
109226666         CDS       T05870                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109226666
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nau03019]
    109226666
   03041 Spliceosome [BR:nau03041]
    109226666
Messenger RNA biogenesis [BR:nau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109226666
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109226666
Spliceosome [BR:nau03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109226666
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 109226666
NCBI-ProteinID: XP_019247035
UniProt: A0A1J6I9Y7
Position
6:complement(18262334..18268968)
AA seq 454 aa
MDLLKKRKLEDNGVITDVPVTSRLTIEDARKILESVTPEQMLEILQTAVVRHADVLDQVR
AIADRDTTQRKLFIRGLGWETNTEKLKAIFGNYGELEEAVVITDKATGKSKGYGFVTFKH
VDGALLALKEPSKKIDGRMAVTQLASAGIQGGPGGGSTNNPVDVSARKIYVANVPYDMQA
ERILQHFCMYGEIEEGPLGFDKATGKSKGYALFVYKTAEAAKASLVDPVKNIDGHQLNCK
LAIDGKKGGKPGGGAQVQTDGHVDQVGPGQYGGPSGITGYGGFPGHSTFGGPGGHGLNSA
YGSGNGIGVGGPGGGSSYGGSQPGGSVSGGGYGGPYGGGGGSHYGGAGSAGYGALASSAT
GGGGGYGGPGALGGGGYGSTGALGGGGLSGVGGALGGAGRGSSMYGLPPSSTGLASGDYP
PQGPHYSQQNQVPGVSPAPRVAPGGMYQGMHSYY
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggaccttttgaagaaacgaaagctcgaggataacggcgttatcaccgacgtccccgtt
accagtagactcaccatcgaagacgcacggaagattctagaatcagtcacccctgaacaa
atgctcgaaatcctacaaaccgctgttgtacgtcacgccgacgttttagaccaagtacga
gcaattgccgatcgcgacaccactcaacggaagctcttcattcgcggactcggctgggaa
acgaatacagaaaaacttaaagcgatttttggtaattacggcgagttagaagaagccgtt
gtaattaccgataaagccactggtaaaagcaaaggttacgggttcgttacgtttaaacat
gttgatggagctttacttgctttgaaggagccgagtaagaagattgatggacgaatggca
gtgactcagctcgcgtcagctgggattcaaggtgggcctggcggcgggagtaccaataat
ccggttgatgtgtcggcgaggaagatttatgtagcgaatgtgccgtatgatatgcaggcc
gagaggattttacagcatttttgtatgtatggggaaatagaggaagggccattagggttt
gataaggcgactgggaagtcaaaagggtatgctttgtttgtgtataagacggcggaggcg
gctaaggcttcgctagtggatcctgttaagaatattgatgggcatcagttgaattgtaag
ctagctattgatgggaagaaagggggaaaacctggaggaggagctcaggttcaaactgat
ggtcatgttgatcaggttggcccgggccagtatggtgggcctagtgggattactggttat
ggtggatttccagggcattcaacctttggtgggcccggcggacatgggctcaattcagca
tacggtagtgggaatggtataggtgtgggtggtcccggtggtggttcatcttatggtggg
agccaacctgggggttctgttagtggtggtgggtatggcggtccatatggtggaggtggg
gggtctcattatggtggggctggttcagctggatatggcgcgttggccagtagtgctact
ggtggcggtggtggatatggcggtcctggggcattgggaggtggtggatatggcagcact
ggggcgctgggaggtggtggcttaagtggagttggtggtgcattaggtggtgcaggccgt
ggctcttcaatgtatgggttacccccaagctcaactgggttggcttcaggagattatcca
ccacagggtcctcattacagtcaacaaaaccaagtgcccggggtatcacctgcacctaga
gttgcacctgggggtatgtaccaggggatgcattcatactactga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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