KEGG T05650: NCHU2750

Neorhizobium sp. NCHU2750: NCHU2750_13980

Entry

NCHU2750_13980    CDS       T05650

Symbol

rpoA

Name

(GenBank) DNA-directed RNA polymerase alpha subunit

K03040

DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]

Organism

nen Neorhizobium sp. NCHU2750

Pathway

nen03020

RNA polymerase

Brite

KEGG Orthology (KO) [BR:nen00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NCHU2750_13980 (rpoA)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nen03021]
    NCHU2750_13980 (rpoA)
   03400 DNA repair and recombination proteins [BR:nen03400]
    NCHU2750_13980 (rpoA)
Enzymes [BR:nen01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     NCHU2750_13980 (rpoA)
Transcription machinery [BR:nen03021]
Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     NCHU2750_13980 (rpoA)
DNA repair and recombination proteins [BR:nen03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      NCHU2750_13980 (rpoA)

SSDB

Motif

Pfam:

RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L DUF211 IDH

Other DBs

NCBI-ProteinID:

AYD00789

Position

1441698..1442708

AA seq 336 aa
MIQKNWQELIKPNKVEFTSSGRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDPKRMVVRKQGPGAVTAGDIQTVG
DIEILNPDHVICTLDDGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLTMTIETDGSVTGEDAVAFAARILQDQLAVFVNFDEPQKEAEE
ESVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY

NT seq 1011 nt +upstreamnt +downstreamnt
atgatccagaagaactggcaggaactgattaagccgaacaaggtggaattcacctcgtcc
ggtcgcaccaaggcaacgctggttgccgaaccccttgagcgcggcttcggcctgacgctc
ggcaacgcgctgcgtcgcgtgcttctgtcgtcgctccgcggtgctgctgtcacggcagtc
cagatcgacggcgttctgcacgagttctcctccatcccgggcgtccgggaagatgtgacg
gacatcgtgctcaacatcaaggaaatcgccatcaagatggacggcgatgatccgaagcgc
atggtcgtgcgcaagcagggccctggtgccgtgaccgctggcgatatccagacggttggc
gacatcgagatcctgaaccccgaccacgtgatctgcacgctggacgacggcgcggagatc
cgcatggaattcacggtcaacaacggcaagggctacgtcccggccgagcgtaaccgtgca
gaggatgccccgatcggcttgatcccggtcgacagcctctactcgccggtcaagaaagtg
tcctacaaggtggaaaacacccgcgaaggccaggttctcgactacgacaagctgaccatg
accatcgaaaccgatggctcggtcacgggtgaagacgccgtagccttcgccgctcgcatc
cttcaggatcagcttgctgtattcgtcaacttcgacgaaccgcagaaggaagctgaagag
gaatcggtcactgaactcgcgttcaacccggctctcctcaagaaggtcgacgaactggaa
ctctccgtccgttcggccaactgcctgaagaacgacaacatcgtttatatcggcgacctc
atccagaagaccgaggcggaaatgctgcgcactccgaatttcggtcgcaagtcgctgaac
gagatcaaggaagttctggcatccatgggcctccatcttggtatggaagttcctgcatgg
ccgccggaaaacatcgaagacctcgctaagcgttacgaagaccagtactaa

All links

Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (6)   

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