KEGG   Nocardia farcinica NCTC11134: ERS450000_04028
Entry
ERS450000_04028   CDS       T04524                                 
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4%2C6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
nfr  Nocardia farcinica NCTC11134
Pathway
nfr00521  Streptomycin biosynthesis
nfr00523  Polyketide sugar unit biosynthesis
nfr00525  Acarbose and validamycin biosynthesis
nfr00541  Biosynthesis of various nucleotide sugars
nfr01100  Metabolic pathways
nfr01110  Biosynthesis of secondary metabolites
nfr01250  Biosynthesis of nucleotide sugars
Module
nfr_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:nfr00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    ERS450000_04028 (rmlB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    ERS450000_04028 (rmlB)
   01055 Biosynthesis of vancomycin group antibiotics
    ERS450000_04028 (rmlB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    ERS450000_04028 (rmlB)
   00525 Acarbose and validamycin biosynthesis
    ERS450000_04028 (rmlB)
Enzymes [BR:nfr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     ERS450000_04028 (rmlB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD RmlD_sub_bind NAD_binding_4 Polysacc_synt_2 NAD_binding_10 adh_short NmrA Sacchrp_dh_NADP
Other DBs
NCBI-ProteinID: CRY80755
UniProt: A0A0H5NYI6
Position
p2:complement(527083..528105)
AA seq 340 aa
MRLLVTGGAGFIGANFVQQTVAERPDATVTVLDALTYAGNRASLAPVADRIDFVHGDIAD
LDLVDELVSGVDAVVHFAAESHNDNSLAEPWPFVQTNIVGTYSLLQAVRRHDVRYHHVST
DEVYGDLTAEQPPFTETTAYNPSSPYSATKASSDLLVRAWTRSFGVRATISNCSNNYGPY
QHVEKFIPRQITNLIDGVRPRLYGAGHQIRDWIHVHDHNRAVWDILERGRIGQTYLIGAN
GELDNKSVVRMLLEAFGRDPDDFDHVTDRPGHDQRYAIDATLLRTELGWTPRYADFRAGL
AATIDWYRANESWWRPMKAATERAYAAAGEQTLTRVPGTD
NT seq 1023 nt   +upstreamnt  +downstreamnt
gtgcgattgctcgttaccggcggagccggattcatcggtgcgaatttcgtccagcagacc
gtcgccgagcggcccgacgccaccgtcaccgtgctcgacgcgctgacctacgcgggcaac
cgagcctcgctcgccccggtggccgaccggatcgacttcgtgcacggcgacatcgccgac
ctcgacctggtcgacgaactggtgagcggtgtcgacgccgtcgtgcacttcgccgccgaa
tcgcacaacgacaactccctcgccgagccgtggccgttcgtgcagaccaacatcgtcggc
acctactcgctgttgcaggccgtgcgcaggcacgacgtgcgctaccaccacgtctccacc
gacgaggtctacggcgatctgaccgccgagcagccgccgttcaccgagaccacggcctac
aacccgtccagcccgtactcggcgaccaaggcctcgagcgatctgctggtgcgcgcctgg
acccgctcgttcggggtccgcgcgacgatctccaactgcagcaacaactacggcccgtac
cagcacgtggagaagttcatcccgcgccagatcaccaacctgatcgacggtgtgcggccc
cgcctgtacggcgccgggcaccagatccgggactggatccacgtgcacgatcacaaccgc
gcggtctgggacatcctcgagcgcggccggatcgggcagacctatctgatcggcgcgaac
ggggaattggacaacaagtccgtcgtgcggatgctgctcgaggcgttcggccgcgatccc
gacgacttcgatcacgtcaccgatcggcccggccacgaccagcgctacgcgatcgacgcc
acgctgctgcgcaccgaactcggctggactccgcgctacgccgacttccgcgccggactg
gccgccaccatcgactggtaccgcgccaacgaatcctggtggcgcccgatgaaagccgcg
accgagcgggcttacgccgccgcgggggagcagaccctcacccgggtgccgggcacggac
tga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (13)   

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