KEGG   Nothobranchius furzeri (turquoise killifish): 107375523
Entry
107375523         CDS       T05163                                 
Symbol
papolg
Name
(RefSeq) poly(A) polymerase gamma isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107375523 (papolg)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nfu03019]
    107375523 (papolg)
Enzymes [BR:nfu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     107375523 (papolg)
Messenger RNA biogenesis [BR:nfu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     107375523 (papolg)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central DUF4269 Nrap_D2 GH97_C
Other DBs
NCBI-GeneID: 107375523
NCBI-ProteinID: XP_015799580
UniProt: A0A1A8V384
Position
sgr03:8438382..8469685
AA seq 827 aa
MKEMSSAMPGGQQPQKHYGITSAISLAPPREIDHLYTKKLCDAMKPFGVFEDEEELNHRL
AVLGKLNNLVKEWIAEISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPR
HVERTDFFQSFFEKLKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNL
DLRGDSILKNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNILG
FLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDP
RVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMTEEFKHGLSVTDEILQGKAEWPKLF
EPPSFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEFITLAHVNSQSFP
GFKETTENDFVSMWFIGIIFKKVENAESVNIDLTFDIQSFTDTVYRQANNINMLKDGMKI
EATHVKKKQLHQYLPPELVQRKKRSIAELNRSSNSESSKRISLDGSALDSSRETDSGTPF
SSPNSKAPPSETNEGVSPPKKIFVEDSPTPSTTTAANEPGLSIPVIGSKPPGKAKPASPP
PASTSTTTVLSEDVTPSATSSPKEEPNGLINGAPAKRPHSPTQEEAAKRHKDQPALNDDC
IFKEPYPPSSETNPHGDAPSTPPQPEVKAKPIPTIDTSRTQRLPSMELPDASSPLPASNS
CRVVKNSIKLALNRTNMTPPKPPVFDGALTTEAPPTSEEKGMSIPVIGSKHAASKHVTPP
VGSSIPTLVSRVADPLNGAASKRPHSPALEEQTKRLKETEKDRIHTS
NT seq 2484 nt   +upstreamnt  +downstreamnt
atgaaagaaatgtcaagcgccatgcctggtgggcagcagccgcagaaacattacggcatc
acctctgccatcagcctggcacctcctagagaaatagatcatctgtacaccaagaagctc
tgcgatgccatgaaaccgttcggtgtgtttgaggatgaagaggagctgaaccacagactc
gctgttctcgggaagttaaacaaccttgttaaagagtggatcgcagaaatcagtgaacta
aagaaccttccaccatcagccattagctgtgtcggcggcaagatatttacgtttggttca
tacagactaggagtgcacacaaagggagctgatattgatgccttgtgtgtggcaccgcgt
cacgtagaaagaaccgacttcttccagtctttctttgagaaattgaaacagcacgaagag
attaaagatctccgggccgttgaagacgcctttgtaccggtgataaaattcaaatttgac
gggattgagatcgacttgctttttgccagattggcgcttcagtccatcccagacaacctg
gacctgagaggggactctattctaaaaaacttggacattcgctgcatccgcagcctcaac
ggttgtcgagtaactgatgaaattttgtacttggtgccaaacaaagaaaacttcaggttg
acactgagagccatcaaactttgggccaaacgtcgagggatctattccaacatcctgggc
tttctgggtggagtttcttgggccatgttggtggccaggacctgccagctctaccccaac
gccgtcgctgccacactcgtccacaagttcttcttggtcttctcaaaatgggagtggcca
aatcctgtattgttaaaacagcctgaggacagtaatctgaacttacctgtgtgggatcct
agagtgaatccatctgacaggtaccacctgatgcccatcatcactccagcttacccccag
cagaattccacctacaacgtttccacttcaacacgcaccatcatgactgaggaattcaaa
cacggtctcagtgtcaccgatgagatccttcaaggtaaagcggaatggccgaagctcttt
gagccgcccagctttttccaaaagtacaagcattacattgttcttactgccagtgcatct
acagaagaaaaccacttagaatggatcggactcgtcgagtcaaagatccgcgttctggtt
ggaaaccttgagaggaatgagttcataacactggctcacgtcaactcccagtccttccct
ggtttcaaagagaccaccgaaaacgactttgtttccatgtggttcattggaatcatcttc
aaaaaggtggagaacgcagagagcgttaatattgacctaacgttcgacatccagtccttc
actgacaccgtttataggcaagccaacaacatcaatatgctgaaggacgggatgaagatc
gaagcgacacatgtgaagaagaaacagctgcatcagtacctccctcctgaactggtgcag
agaaagaaacggagcatagcagagttgaaccgtagctccaacagtgaaagctcgaagcgg
atctctctggacggcagtgccctggacagctccagagagacggactcggggacccccttc
agttctcccaacagcaaagcccctccgtctgaaacgaacgaaggagtcagcccccccaag
aagatctttgtagaggactccccaacaccaagcacaaccactgccgccaacgagccgggc
ttgtccatcccggtcatcggctcaaagcctcctggtaaagcgaagcctgcttctcctcct
cctgccagcacctcaaccaccacagtcctgagtgaggatgtgacgcccagcgccaccagc
agtcccaaagaggaacccaacggcctcatcaatggagcccctgccaagagaccacactcc
cccacgcaagaggaggcggccaagagacacaaagatcagccggccttgaatgacgactgt
atatttaaagagccatatcctccatcgtcggaaaccaatccacacggagacgcgccaagt
actcctcctcagcctgaagtaaaagcaaaacccattccaacaatcgatacctcaagaaca
cagagacttcccagcatggagctgccagatgcgtcatcgcccctcccggccagcaacagc
tgtcgtgttgttaaaaattccatcaaactggccctcaaccgcaccaacatgacgcctccc
aaaccccctgtgtttgatggcgcccttactactgaggctcctcccaccagcgaagagaaa
ggcatgtccatccctgtcattggttcaaaacacgcggcgtccaaacacgtgactcccccc
gtcggcagctccatccccactctagtgagcagagttgccgaccccttgaacggagcggcg
tctaagcgaccccactctcccgctctggaggaacaaaccaagaggctgaaagaaacggag
aaagacagaatccacacatcttga

  All links  
Gene (29)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (52)   

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