KEGG   Nocardia gipuzkoensis: LTT66_28330
Entry
LTT66_28330       CDS       T07945                                 
Name
(GenBank) UdgX family uracil-DNA binding protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
ngp  Nocardia gipuzkoensis
Pathway
ngp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ngp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LTT66_28330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ngp03400]
    LTT66_28330
Enzymes [BR:ngp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     LTT66_28330
DNA repair and recombination proteins [BR:ngp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LTT66_28330
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: UGT67117
Position
complement(6186358..6186984)
AA seq 208 aa
MKAPGAAMFVPEDADLAHLRQAACGCHGCDLYRHATQTVFGAGPPDADVVLIGEQPGGQE
DVLGEPFVGPAGRLLDRALADVGIDRDTVYVTNAVKHFKFVERGKRRIHKQPGRTEVIAC
SAWLHAELDLLRPRLVVCLGAIGAQAVLGPSFKVSERRGEVIDTADFRVIATVHPSSVLR
APDRTAAYEAFVADLRIVREQLGKPAER
NT seq 627 nt   +upstreamnt  +downstreamnt
atgaaggcacccggcgccgcgatgttcgtacccgaggacgcggacctggcgcacctgcgg
caagcggcctgtggctgtcacggctgcgatctctaccgccacgccacgcagacggtgttc
ggcgccggtcccccggacgcggacgtggtgctgatcggcgagcaacccggcggtcaggag
gacgtcctgggtgagccgttcgtcggtccggccggacgcctgctcgaccgcgcgctggcg
gacgtcggcatcgaccgcgacacggtctacgtgaccaacgcggtgaagcacttcaaattc
gtggagcgcggcaagcgacggattcacaagcagccgggccgcaccgaggtgatcgcctgc
tcggcgtggttgcacgccgaactcgatctgctgcggccgcggttggtggtgtgtctcggc
gcgatcggcgcgcaggcggtgctcggcccgtcgttcaaggtcagcgagcgccgcggtgag
gtcatcgatacggcggacttccgcgtgatcgccacggtgcacccgtcatcggtgttgcgc
gcgcccgaccggaccgcggcctacgaggcattcgtcgccgatctgcgcatcgtgcgggaa
caactgggaaagcccgccgaacgctga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (2)   

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