KEGG   Neodiprion lecontei (redheaded pine sawfly): 107227948
Entry
107227948         CDS       T09006                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
nlo  Neodiprion lecontei (redheaded pine sawfly)
Brite
KEGG Orthology (KO) [BR:nlo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nlo03041]
    107227948
Spliceosome [BR:nlo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    107227948
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    107227948
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-GeneID: 107227948
NCBI-ProteinID: XP_015524761
UniProt: A0A6J0CBL7
Position
2:13516969..13521220
AA seq 869 aa
MSENTMKAKPDKRCSPSINSDDETEHDKRSRRSKRKNDGSDYEDKSDRHSRRKERSDSKY
YRSNNSSRNGRDRDRRRHRNDKERTRRSEDDRQTATDENDRSYRKGHDSNDNGSLRRYWS
DQYWNKYPTNKQERIGQRFYGGRHEERNESPKRRYDDKENDEDVACAEKNQITVENEREK
ITPAQKRTVDLLTSKTGGAYIPPAKLRMMQAEITDKSGAAYQRISWEALKKSIHGYINKV
NTSNIGLITRELLHENIVRGRGLLARSIIQAQAASPTFTPIYAALTAVINSKFPNIGELL
LKRLVIQFKRGFRRNDKAQCISSATFVAHLVNQRVAHEILALEILTLLVETPTDDSVEVA
IAFLKECGMKLTEVSKKGIEAIFEMLRNILHEGQLDKRVQYMIEVIFQIRKDGFKDHEAV
NEELDLVEEDNQFTHLVTLDEATDPQDVLNVFKFDPDYIATEEKYKALSKEILDTDSSGS
DGSDGDEEDNSSDEEDSNITGEAKEDVIVDNTETNLTALRRTIYLTIHSSLDFEECAHKL
MKMQLKPGQEIELCHMFLDCCAEMRTYEKFFGLLAGRFCAINKIYVTPFEQIFIDSYDTI
HRLDTNKLRNVSKFFAHLLFTDSISWEVLSCIKLNEEDTTSSSRIFIKILFQELSEYMGL
SKLNQRVKDVTLQGAFEGLFPRDDPKNTRFAINFFTSIGLGGLTDELREHLKSRPKPAVV
PEFVEDKKESSSSSSSSSSSSESSSSSSSSSSSSETASSSESDDHRKKKSAKEKTQKKKK
KNKTRVTKKKLKNKSIVKDVWDIETDRNCISSTHETNEGRRNSDKTPNDRLSQSKRSTKP
NRHGEWDRESDDRTNTHKDKNNRHRRHKD
NT seq 2610 nt   +upstreamnt  +downstreamnt
atgtctgagaacacaatgaaagccaaacctgacaagaggtgttcgccatcgataaacagt
gacgatgaaactgaacacgataaacgttcgaggagaagtaaacgtaagaacgatggttca
gactatgaagataagagtgatcgtcacagtaggcgaaaggagagaagtgattctaaatac
tacaggagcaacaacagtagcagaaatggcagagatagagacaggagacgacataggaat
gacaaggaacgaactcgtcgaagtgaagacgacaggcaaacagccacagatgagaatgat
agatcgtatcgaaagggtcatgactcgaatgacaatggttcactacgtagatattggagc
gatcagtactggaacaagtatccgaccaataaacaagaaagaataggacagcgtttttat
ggcggtcgtcacgaggagaggaatgaatcacccaaacgtcgctacgacgataaagaaaat
gatgaggatgtcgcgtgtgctgaaaagaatcagatcacggtggaaaatgaacgagaaaaa
attacaccagcgcaaaagcgaacggtggatcttctgacatcgaaaactggtggtgcttac
attccaccagccaaactccgcatgatgcaggctgagatcactgacaaatcgggagctgca
taccagcggatatcttgggaagccttgaaaaagtccattcatggatacattaataaagtc
aacaccagcaatatcggattaatcactagagaattgttacacgagaacattgtcagaggt
cgaggcctgttggcgagatctattattcaggctcaagctgcctcccctactttcacacct
atctatgcagcacttactgctgtgatcaattcaaaattccctaatattggtgaattgttg
ctcaagcgtctagtcatacagttcaagcgtggatttcgccgtaatgataaagctcagtgc
atttcttcggccacgtttgttgcccatttggtcaaccagcgtgttgcccatgaaatctta
gctttggaaatactaactttactagtagagacgccaactgatgactccgtcgaagttgcc
atcgcatttttgaaagaatgtggcatgaaactcacagaggtttccaagaaagggatcgag
gcaatatttgaaatgcttcgcaacatcttacatgaaggacagctggataaaagagtacaa
tatatgatagaagttatattccaaattagaaaagacggatttaaagatcacgaggctgtg
aatgaagagcttgaccttgttgaagaggataaccagtttactcaccttgtgactttggac
gaagcaactgaccctcaagatgtactgaacgttttcaagttcgatccggactacattgca
acagaggaaaaatataaagcattgagcaaagagattcttgatactgacagtagcggttca
gatggttctgatggtgatgaagaagataactcctctgacgaggaagatagtaatatcaca
ggagaagcaaaggaagatgttatagtcgacaacactgaaactaatttaacagcgttgcgc
agaacgatttatttaactattcattcttctctcgactttgaggaatgtgcgcacaaattg
atgaagatgcagctgaagcctgggcaagaaattgaactatgtcacatgttcctggactgt
tgcgcagagatgaggacatatgagaaattctttggtctcttagctgggcgattttgcgcg
attaacaaaatctacgtgacgccgtttgaacaaattttcatcgattcgtacgatacaata
catcgtttggacaccaacaaactacgtaacgtgtccaaattctttgctcatttgttgttc
actgattccatttcttgggaggttctatcttgcataaaattaaatgaagaagatactacc
agctctagtcgtatcttcataaaaattttattccaagaattatccgagtatatgggactt
tcaaaattaaatcagcgtgtgaaagatgtgactttgcaaggagccttcgagggtttattt
ccacgagatgatccaaagaatacaagatttgctatcaattttttcacttccattggtctg
ggtggtcttacggatgaattacgagaacacttgaaatcgcgtccgaagccagctgtagtg
ccagaatttgttgaagacaaaaaagagtcgtctagttccagcagttcatcttcatctagt
tccgaatcctcgtcgagttcatcgtcgtcgtcatcatcatccgagactgcaagttcttct
gaatctgacgaccatcggaaaaagaaatctgcgaaagaaaaaacccaaaaaaagaagaag
aaaaacaaaacgcgagtgacaaaaaagaaactaaaaaacaaatcaatcgtgaaagatgtt
tgggatatagaaactgatagaaactgtattagcagcactcacgagacaaatgaagggcgc
aggaatagcgataaaacgcctaatgatagattgagtcaatcaaaacgatcaaccaaacca
aatcggcatggagaatgggacagggaaagtgacgatcggacaaacacgcacaaggacaaa
aataataggcatagaaggcataaggattag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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