KEGG   Nordella sp. HKS 07: G5V57_29395
Entry
G5V57_29395       CDS       T06462                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
noh  Nordella sp. HKS 07
Pathway
noh03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:noh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    G5V57_29395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:noh03021]
    G5V57_29395
   03400 DNA repair and recombination proteins [BR:noh03400]
    G5V57_29395
Enzymes [BR:noh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     G5V57_29395
Transcription machinery [BR:noh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     G5V57_29395
DNA repair and recombination proteins [BR:noh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      G5V57_29395
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2 IDH TTHA0829-like_ACT
Other DBs
NCBI-ProteinID: QIG51471
UniProt: A0A6G6X1L3
Position
complement(6227912..6228934)
AA seq 340 aa
MHVNQKNWQELIRPSKLEVSAGRDRKRVATLVAEPLERGFGTTLGNALRRVLLSSLQGAA
VSSVQIDGVLHEFSSIAGVREDVTDIVINIKEIALAMHAEGPKRLVLRKEGPGVVKAGDI
QQTADVQILNPDHVICTLDEGAEVRMEFTINNGKGYVPSERNRPEDAPIGLIPVDSIYSP
VRRVSYKIENTREGQILDYDKLIMTVETNGSMSPEDAVAYAARILQDQLSVFINFDEPSK
VVHEDTRPELEFNAALLKKVDELELSVRSANCLKNDNIVYIGDLIQKSEAEMLRTPNFGR
KSLNEIKEVLAQMGLHLGMEVPNWPPENIDELAKKYETHY
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgcatgtgaatcagaagaactggcaggaactcatccgtccgagcaagctcgaagtctcg
gccgggcgtgaccgcaagcgcgtggcgacactcgtcgccgagccgctcgagcgcggcttc
ggcacgacactcggcaatgcgctgcgccgcgtccttctttcctcgctgcagggtgcggcg
gtgagctcggtgcagatcgacggtgtcctgcatgaattttcctcgatcgcgggggtgcgc
gaggacgtcaccgatatcgtcatcaatatcaaggaaatcgcgctcgccatgcatgcggag
ggcccgaagcggctcgtcctgcgcaaggagggcccgggcgtggtcaaggccggcgatatc
cagcagaccgccgatgtgcagattctcaatccggaccatgtcatctgcacgctcgacgag
ggtgccgaagtgcgcatggagttcaccatcaacaacggcaagggttatgtgccctccgag
cgcaaccgtcccgaggacgcgccgattggcctgatcccggtcgacagcatctacagcccg
gtccgccgcgtgtcgtacaagatcgagaacacccgcgaaggccagatcctcgattatgac
aagctgatcatgacggtcgagaccaacggctcgatgagccccgaggacgcggtcgcctat
gcggcgcgcatcctgcaggaccagctgtcggtcttcatcaatttcgacgagccgtcgaag
gtcgttcacgaggacacccgtccggagctggaattcaacgccgcccttctcaagaaggtc
gacgagctcgagctctcggtgcgctccgccaactgcctgaagaacgacaacatcgtctat
atcggcgacctcatccagaagagcgaggcggagatgctccgtaccccgaacttcgggcgc
aagtcgctcaacgagatcaaggaagtgctcgcgcagatggggctccatctcggcatggaa
gtgccgaactggccgcccgagaacatcgacgagctcgccaagaaatacgaaacgcattac
tga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (8)   

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