KEGG   Novosphingobium sp. THN1: C7W88_07945
Entry
C7W88_07945       CDS       T05635                                 
Name
(GenBank) hypothetical protein
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
not  Novosphingobium sp. THN1
Pathway
not02020  Two-component system
not02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:not00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    C7W88_07945
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C7W88_07945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:not03000]
    C7W88_07945
Transcription factors [BR:not03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    C7W88_07945
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 GntR MarR_2 MarR HVO_A0261_N HTH_24 Crp HTH_IclR HVO_A0114
Other DBs
NCBI-ProteinID: AXU18978
Position
1602103..1602753
AA seq 216 aa
MVPDDVQAVLALHGRQMRVRKGQVLLAVGLPATDVYVVLEGSVSVSLVSAQGRETVLRAI
GAREMFGELAAIDGEPRSADVVAAENSTLLVIPGPTFTGLLGVEPVLSLWLARYLSHQVR
YLTNRIYELSTMGVGPRLQAELLRLAGEPDQSGAATINRIPTQAELAARIGTNRETVTRE
FSLLIKEGLVTREGRRIVVPSVARLADRLHRYSQSS
NT seq 651 nt   +upstreamnt  +downstreamnt
atggtgccggatgatgtccaggcagttcttgctcttcacgggcggcagatgcgcgtgcgc
aaggggcaggtcctgcttgcggtgggtctgccagcgaccgacgtctacgtcgtgctggaa
ggcagcgtcagcgtctcgctcgtttcggcgcaggggcgcgagacggtgctccgggccatc
ggcgcgcgggagatgttcggggaattggccgcgatcgacggggagccgcgctcggccgac
gtggtcgcggctgagaacagtacgctgctggtcattcccgggccgacctttaccggcctg
ctgggcgtggagccggtcctgtcgctgtggctggcgcggtacctctcgcaccaggtccgc
tacctgaccaaccgcatctacgagctttcgacgatgggcgtcgggccgcgcctgcaggcc
gaattgctgcggctggcgggtgagccggaccagtccggcgccgccacgatcaatcgcatt
ccgactcaggccgaacttgccgcccgcatcggcaccaaccgcgaaaccgtgacgcgcgaa
ttctcgctgctgatcaaggaagggctggtcacgcgcgaagggcggcgcatcgtcgtgcca
tcggtggcgcggctggccgaccggctgcatcgttattcgcagagcagttga

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