KEGG   Novosphingobium sp. PP1Y: PP1Y_AT34596
Entry
PP1Y_AT34596      CDS       T01515                                 
Name
(GenBank) cyclic nucleotide-binding protein
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
npp  Novosphingobium sp. PP1Y
Pathway
npp02020  Two-component system
npp02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:npp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PP1Y_AT34596
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PP1Y_AT34596
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:npp03000]
    PP1Y_AT34596
Transcription factors [BR:npp03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    PP1Y_AT34596
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 Crp HVO_A0261_N
Other DBs
NCBI-ProteinID: CCA94186
Position
3626465..3627193
AA seq 242 aa
MPQLSDLDRHLPAPLAEAVAPLARLAQFKAGQTVMGHQDETSDVFVILEGTLRIELLSQN
GREITLSDAGPGALVGEFAALDDQPRSATVMATTKASLARIPGAAFREAAFAHPESAEWL
TRRLVRMLRQLNERIFELNALAVRSRLHCELLRFCLDTGFKGNEATITPSPTHAELANRI
GTHREAVTRELRYLAEQGITSSSGRKLIVCDIARLAEIVRAAAGDVELIQRANQAGIGRG
TA
NT seq 729 nt   +upstreamnt  +downstreamnt
atgccgcaattgtccgatctggaccgtcaccttcccgcgccacttgccgaagccgttgcg
ccgcttgcacgcctggcgcagttcaaggccgggcagacggtcatgggccaccaggacgag
acgagcgacgtcttcgtcatcctcgaaggcacgctgcggattgaactgctctcgcagaac
ggacgcgagatcacgctcagcgatgccggtccgggcgcactcgtgggggaattcgccgcg
cttgacgaccagccgcgctcggcaacggtcatggccactaccaaggcaagtctggcgcgt
attcccggggcggcctttcgcgaagccgcgttcgcgcatccggaatcggcggaatggctg
acccgccgcctcgtgcgcatgctgcgccagctcaacgagcggatcttcgagctcaatgcc
cttgccgtgcgcagccgcctgcactgcgaactgctgcgcttctgcctcgataccggcttt
aagggtaacgaggcgacgatcacgccttcgcccactcatgccgagctggccaaccgcatc
ggcacccaccgcgaggcagtgacccgcgaactgcgctaccttgccgaacagggcatcacg
tccagttccgggcgcaagctgatcgtctgcgacattgcccgactggcggaaatcgtgcgc
gccgctgccggggacgtcgaactgatccagcgggccaaccaggccggaatcggccgcggc
acggcctga

  All links  
Gene (5)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (9)   

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