KEGG   Neodiprion pinetum (white pine sawfly): 124212382
Entry
124212382         CDS       T08966                                 
Symbol
ncm
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
npt  Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:npt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:npt03041]
    124212382 (ncm)
Spliceosome [BR:npt03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    124212382 (ncm)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    124212382 (ncm)
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-GeneID: 124212382
NCBI-ProteinID: XP_046468272
Position
2:13299194..13303333
AA seq 869 aa
MSENTMKAKPDKRCSPSINSDDETEHDKRSRRSKRKNDGSDYEDKSDRHSRRKEKSDSKY
YRSNNSSRNGRDRDRRRHRNDKERTRRSEDDRQTATDENDRSYRKGHDSNDNGSLRRYWS
DQYWNKYPTNRQERIGQRFYGGRHEERNESPKRRYDDKENDEDVACAEKNQITVENEREK
ITPAQKRTVDLLTSKTGGAYIPPAKLRMMQAEITDKSGAAYQRISWEALKKSIHGYINKV
NTSNIGLITRELLHENIVRGRGLLARSIIQAQAASPTFTPIYAALTAVINSKFPNIGELL
LKRLVIQFKRGFRRNDKAQCISSATFVAHLVNQRVAHEILALEILTLLVETPTDDSVEVA
IAFLKECGMKLTEVSKKGIEAIFEMLRNILHEGQLDKRVQYMIEVIFQIRKDGFKDHEAV
NEELDLVEEDNQFTHLVTLDEATDPQDVLNVFKFDPDYIATEEKYKALSKEILDTDSSGS
DGSDGDEEDNSSDEEDSNITGEAKEDVIVDNTETNLTALRRTIYLTIHSSLDFEECAHKL
MKMQLKPGQEIELCHMFLDCCAEMRTYEKFFGLLAGRFCAINKIYVTPFEQIFIDSYDTI
HRLDTNKLRNVSKFFAHLLFTDSISWEVLSCIKLNEEDTTSSSRIFIKILFQELSEYMGL
SKLNQRVKDVTLQGAFEGLFPRDDPKNTRFAINFFTSIGLGGLTDELREHLKSRPKPAVV
PEFVEDKKESSSSSSSSSSSSESSSSSSSSSSSSETASSSESDDHWKKKSAKEKTQKKKK
KNKTRVTKKKLKNKSIVKDVWDIETDRNCISSTHETNEGRRNSDKTPNDRLSQSKRSTKP
NRHGEWDRESDDRTNTHKDKNNRHRRHKD
NT seq 2610 nt   +upstreamnt  +downstreamnt
atgtctgagaacacaatgaaagccaaacctgacaagaggtgttcgccatcgataaacagt
gacgatgaaactgaacacgataaacgttcgaggagaagtaaacgtaagaacgatggttca
gactatgaagataagagtgatcgtcacagtaggcgaaaggagaaaagtgattctaaatac
tacaggagcaacaacagtagcagaaatggcagagatagagacaggagacgacataggaat
gacaaggaacgaactcgtcgaagtgaagacgacaggcaaacagccacagatgagaatgat
agatcgtatcgaaagggtcatgactcgaatgacaatggttcactacgtagatattggagc
gatcagtactggaacaagtatccgaccaatagacaagaaagaataggacagcgtttttat
ggcggtcgtcacgaggagaggaatgaatcacccaaacgtcgctacgacgataaagaaaat
gatgaggatgtcgcatgtgctgaaaagaatcagatcacggtggaaaatgaacgagaaaaa
attacaccagcgcaaaagcgaacggtggatcttctgacatcgaaaactggtggtgcttac
attccaccagccaaactccgcatgatgcaggctgagatcactgacaaatcgggagctgca
taccagcggatatcttgggaagccttgaaaaagtccattcatggatacattaataaagtc
aacaccagcaatatcggattaatcactagagaattgttacacgagaacattgtcagaggt
cgaggcctgttggcgagatctattattcaggctcaagctgcctcccctactttcacacct
atctatgcagcacttactgctgtgatcaattcaaagttccctaatattggtgaattgttg
ctcaagcgtctagtcatacagttcaagcgtggatttcgccgtaatgataaagctcagtgc
atttcttcggccacgtttgttgcccatttggtcaaccagcgtgttgcccatgaaatctta
gctttggaaatactaactttactagtagagacgccaactgatgactccgtcgaagttgcc
atcgcatttttgaaagaatgtggcatgaaactcacagaggtttccaagaaagggatcgag
gcaatatttgaaatgcttcgcaacatcttacatgaaggacagctggataaaagagtacaa
tatatgatagaagttatattccaaattagaaaagacggatttaaagatcacgaggctgtg
aatgaagagcttgaccttgttgaagaggataaccagtttactcaccttgtgactttggat
gaagcaactgaccctcaagatgtactgaacgttttcaagttcgatccggactacattgca
acagaggaaaaatataaagcattgagcaaagagattcttgatactgacagtagcggttca
gatggttctgatggtgatgaagaagataactcttctgacgaggaagatagtaatatcaca
ggagaagcaaaggaagatgttatagtcgacaacactgaaactaatttaacagcgttgcgc
agaacgatttatttaactattcattcttctctcgactttgaagaatgtgcgcacaaattg
atgaagatgcagctgaagcctgggcaagaaattgaactatgtcacatgttcctggactgt
tgcgcagagatgaggacatatgagaaattctttggtctcttagctgggcgattttgcgcg
attaacaaaatctacgtgacgccgtttgaacaaattttcatcgattcgtacgatacaata
catcgtttggacaccaacaaactacgtaacgtgtccaaattctttgctcatttgttgttc
actgattccatttcttgggaggttctatcttgcataaaattaaatgaagaagacactacc
agctctagtcgtatcttcataaaaattttattccaagaattatccgagtatatgggactt
tcaaaattaaatcagcgtgtgaaagatgtgactttgcaaggagccttcgagggtttattt
ccacgagatgatccaaagaatacaagatttgctatcaattttttcacttccattggtctg
ggtggtcttacggatgaattacgagaacacttgaaatcgcgtccgaaaccagctgtagtg
ccagaatttgttgaagacaaaaaagagtcgtctagttccagcagttcatcttcatctagt
tccgaatcctcgtcgagttcatcgtcgtcgtcatcatcatccgagactgcaagttcttct
gaatctgacgaccattggaaaaagaaatctgcgaaagaaaaaacccaaaaaaagaagaag
aaaaacaaaacgcgagtgacaaaaaagaaactaaaaaacaaatcaatcgtgaaagatgtt
tgggatatagagactgatagaaactgtattagcagcactcacgagacaaatgaagggcgc
aggaatagcgataaaacgcctaatgatagattgagtcaatcaaaacgatcaaccaaacca
aatcggcatggagaatgggacagggaaagtgacgatcggacaaacacgcacaaggacaaa
aataataggcatagaaggcataaggattag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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