KEGG   Nicotiana tabacum (common tobacco): 107787916
Entry
107787916         CDS       T04643                                 
Name
(RefSeq) nuclear poly(A) polymerase 4
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107787916
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107787916
Enzymes [BR:nta01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     107787916
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     107787916
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Nrap_D2
Other DBs
NCBI-GeneID: 107787916
NCBI-ProteinID: XP_016465018
UniProt: A0A1S3ZL42
Position
22:complement(37594445..37601065)
AA seq 682 aa
MGVSNCATTLPPSKQYGVTKPLSLAGPTEADIQRTKELEKFLVGAGLYESAEEAAKRERV
LCQLKQIVKDWVKELTRLRGYSDQMIEDANAVILTFGSYRLGVHGPGADIDTLCVGPSYV
NREDDFFFVLHNILAKREEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPDDLD
ISSETMLCNVDEPTVRSLNGCRVADKIIKLVPNIEFFRTTLRCLKFWAKQRGVYSNVTGF
LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCQIEDKELGFSVWDPR
KNPWDRTHQMPIITPAYPCMNSSYNVSASTLRVMTEQFQFGNNICQEIELNKAQWTVLFE
QYPFFESYKNYLQVDIVAADADDLLVWRGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV
DPFKQCAHRAFFMGLQRRQGELGQEGQQFDIRGTVDEFRHQINMYMYWKPGMEMFVSHVR
RKQIPSYVLPDGYKRSQTARIMCVQQAEKPSCNDSVCRSRSGERGLKRKKELEGAEEKQQ
SQDKRQSISPPRRDSLSPELIVSQKGGMFLQQCSSTVSGGKRKSNETSNNFTSAKMQVAI
LDKDACSEPSKSQGAQFAQSADGCVYHPSGVTNLVEVSTCEDPAHELLRLSHDGHLVGST
GCSSLYSSQGELIQGRVQVTIK
NT seq 2049 nt   +upstreamnt  +downstreamnt
atgggggtttccaattgtgctactactttaccgccgtccaagcagtatggggtgacgaaa
cctttgtctctagctgggcctacggaggctgatattcagcgtaccaaagagttggaaaag
tttttggtcggtgctggactatatgaaagcgctgaggaggctgctaagagagaacgagtt
ctctgccagcttaagcagattgtgaaggactgggtgaaagaacttactcggctgagaggg
tacagtgatcagatgattgaggatgcaaatgctgtcattttaacctttggttcttatcgg
cttggggtgcatggtcctggagctgacatagacaccttatgtgttggaccatcctatgtg
aatcgagaggatgacttcttctttgtattgcataatattttggcgaagagggaagaagtt
acagaactacaaccagttccagatgcacatgtccctgttatgaagtttaagtttgacggg
atctcaattgatcttctctatgcaagcatttctcttttggttgtacccgatgatttggac
atatccagtgaaaccatgttatgcaatgttgatgaaccaactgtaaggagcctcaatggc
tgcagggtggctgataaaatcattaaacttgttccaaatattgagtttttccgaaccaca
cttcgatgtttaaagttttgggctaaacagcgtggtgtttattcaaatgtaactgggttt
cttggtggagtgaactgggctcttctggttgctcgggtttgccaactctatccaaatgct
gttccgagtatgctggtttctcgtttctttcgggtatatacacaatggcgctggccaaat
cctgtgatgctttgtcagatagaggataaagaacttggattctctgtctgggatccacga
aaaaatccttgggaccggacacatcagatgccaattattacacctgcctatccttgcatg
aactcaagctacaacgtctctgcaagtactcttcgagttatgacggaacaatttcaattc
ggtaacaacatatgtcaggaaattgagctgaataaagctcagtggactgtactgtttgag
cagtatcctttcttcgaaagctacaagaattatttgcaagttgacatagttgcagctgat
gctgatgacttgcttgtatggagaggctgggttgaatcccgattaaggcagcttactttg
atgatagagcgggacacatatgggaagttgcagtgccatccttatccccatgagtatgtg
gatcccttcaaacaatgtgcccatcgtgccttcttcatgggtttgcagaggaggcaaggg
gagttaggtcaagaaggccagcaatttgatattcgtgggacagttgatgagtttagacac
caaataaacatgtatatgtattggaaaccaggaatggaaatgtttgtgtctcatgttcgt
agaaaacagattccctcttatgttctaccagacggttataaacgaagccaaacagcaagg
ataatgtgtgtgcagcaggcagagaaaccatcctgcaatgatagtgtatgcaggtcaaga
tctggagaaaggggcttgaaaaggaaaaaagagcttgaaggtgcagaagagaagcaacag
agtcaggacaaaagacaatctattagccctccaagaagggactcactttcacctgaactt
attgttagtcagaaaggtggcatgttcttacaacagtgttcctcgacagtgtctggaggg
aagagaaagagtaatgaaacttcaaataatttcaccagtgctaagatgcaggttgctatt
ctggacaaagatgcctgctctgaaccaagtaagtcacaaggagcacaatttgcgcaaagt
gctgatggatgcgtataccatcctagtggtgtcacaaacctcgttgaggtcagtacatgt
gaggatcctgcacatgaattgctccgactcagccatgacggtcatctagtgggcagtact
ggttgcagctctctctattcctctcagggtgaacttatacagggccgagtccaagtcact
atcaaataa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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