KEGG   Caenibius tardaugens: EGO55_10980
Entry
EGO55_10980       CDS       T05741                                 
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
ntd  Caenibius tardaugens
Pathway
ntd02020  Two-component system
ntd02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ntd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    EGO55_10980
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    EGO55_10980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ntd03021]
    EGO55_10980
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:ntd02035]
    EGO55_10980
Transcription machinery [BR:ntd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     EGO55_10980
Bacterial motility proteins [BR:ntd02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    EGO55_10980
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r4_2 Sigma70_r2 HTH_23 GerE HTH_Tnp_4 HTH_16
Other DBs
NCBI-ProteinID: AZI36407
UniProt: U2YQ38
Position
complement(2377580..2378329)
AA seq 249 aa
MTGARRRGVALLVRAERVEAALWRAFHGHGGSEQRQRLFDHYQPFARKLAGAQFARRAMG
GYERADMEQLAYEALLQAIDRFEPERAIPFPAFARRRILGHISNGIAVMSESAAQYRYRQ
RAERDRLRSLRDAAPGNTDSADPLAALSQLAATLAIGLMAEETDPVDPDTLPDEQPSAYE
SLVWYQMRQKIREQIAALPERERYVIGQHYTAGVSFQQIAIILGISKGRVSQIHRAALLR
LREQLARFR
NT seq 750 nt   +upstreamnt  +downstreamnt
atgaccggcgcacgtcggcgcggggtggccctgctggtccgggcggaacgggtggaggcg
gcactgtggcgcgcctttcacggccatggcggatcggaacaacgccagcgcctgttcgat
cattaccagcctttcgcccgcaagctggccggggcgcagttcgcgcgacgggcaatgggc
gggtatgaacgcgccgacatggaacagctcgcttacgaggcgctgctgcaggcgattgac
cggttcgaaccggaacgggcgatcccgttccccgccttcgcgcgcaggcgcattctgggc
catatcagcaacggcatcgccgtgatgagcgaaagcgccgcgcaataccgctatcgccag
cgggcggagcgggaccggctgcgatccctgcgtgacgcggcgcccggcaataccgatagt
gccgatcccctggccgccctgtcgcaactggccgccacattggcgatcgggctgatggcg
gaagaaacggacccggtcgatcccgacacgctgcctgacgaacagccttcggcttacgaa
agcctcgtctggtatcagatgcggcagaaaatccgcgaacagatcgccgcactgcccgag
cgggagcggtatgtgatcggtcaacattacaccgccggcgtgagcttccagcaaatcgcc
attatactggggatcagcaaggggcgcgtatcgcagattcatcgcgcggccctgctgcgc
ctgcgcgaacaactggcccggtttcgctga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (9)   

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