KEGG   Olleya aquimaris: DZC78_12190
Entry
DZC78_12190       CDS       T05582                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
oaq  Olleya aquimaris
Pathway
oaq02020  Two-component system
oaq02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:oaq00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DZC78_12190 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    DZC78_12190 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oaq03021]
    DZC78_12190 (rpoN)
Transcription machinery [BR:oaq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     DZC78_12190 (rpoN)
SSDB
Motif
Pfam: Sigma54_CBD Sigma54_DBD Sigma54_AID SF3b1 LacI
Other DBs
NCBI-ProteinID: AXO81113
Position
complement(2674169..2675629)
AA seq 486 aa
MLKQYLQFKLSQKLSPQQIQLMKLIQLPTQAFEQRLKQELEENPALEGGKEEVKDEFDDA
FDNSADDFNDNETIDAGDINVDDYLSDDEIPDYRTSVNNYSADDDEKSVPYAAGTSFTQH
LVNQLNTYRLSEEERSIAEFLVGSVDESGYIRRQLIDIVDDLAFTQSVYTEEDKVANVLK
IVHQLDPAGVGARNLQECLSIQLHRKDKQPDVLLAANIIDNAFDQFTKKHYKKLMQKFDI
TELQLKDAIHEIERLNPKPGGSYAGNNKIVEHVVPDFAIRIVDGELELTLNGRNAPELHV
SRQYSNMLKGYKESKDKSKSQKDAVLFIKQKLDAAKWFIDAIKQRQQTLFVTMSSIMHYQ
KEYFLTGDERNLKPMILKDIADEIEMDVSTVSRVANSKYVDTPYGTKLIKEFFSESMTND
QGEEVSTREIKKILETVIEEESKKKPLTDEALSKILKEKGYPIARRTVAKYREQLDIPVA
RLRKKI
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgcttaaacaatacctacagtttaaattatctcaaaagttgtctccacaacaaattcaa
ttaatgaaattgatacagttgccaacgcaagcttttgaacaacgtttaaaacaagagtta
gaagaaaatcctgctcttgaaggtggtaaagaagaagtaaaagatgaatttgatgatgct
tttgataattctgcagatgattttaatgataatgaaaccattgatgctggagacattaat
gttgatgattatttaagtgatgatgaaattcctgactatcgtactagtgtaaataattat
agtgcagatgacgacgaaaaaagtgtaccctatgctgcaggaacttctttcacccaacat
cttgttaatcaattaaacacttatagattaagtgaagaagaacgcagtattgccgaattt
ttagttggtagtgtggacgagagtggttacatacgtagacaattaattgatattgtagac
gatttagcctttacacaaagtgtttatacagaagaagacaaagtcgcaaatgtacttaaa
attgtacatcaattggatcctgctggtgtaggtgcacgtaatttacaagagtgtctaagc
atacaactacatcgtaaagacaaacaacctgatgtcctattggctgcaaatataattgat
aatgcgtttgatcaatttactaaaaagcattacaaaaaattaatgcaaaaatttgacatc
acagagttacaacttaaagatgccattcatgaaatagaacgtcttaatccaaaacctgga
ggctcatatgctggaaataataaaattgtagagcatgtagtacctgactttgctattaga
attgttgatggcgaattagaacttacacttaatggacgtaatgctccagaattacatgtt
tcacgacagtatagcaatatgcttaaaggctataaagaaagtaaagataaaagtaaatct
caaaaagatgctgtcttatttataaagcaaaaactagatgcagcaaaatggtttattgat
gctattaagcaaagacaacaaaccttatttgtaactatgagtagtataatgcattatcaa
aaagaatattttttaactggtgatgagcgcaacttaaaaccaatgatattaaaagatatt
gctgacgagatagaaatggatgtttctacagtatcacgtgtagcgaatagtaaatatgtt
gatacaccttacggaacaaaattaatcaaagagtttttctctgaatctatgacgaatgat
caaggtgaagaagtttctacaagagaaattaaaaagatactagaaactgtaattgaagag
gaatctaagaaaaaaccattaacagatgaagctttatctaaaattttaaaagaaaaaggc
tatccaattgctagacgtacagtagctaaatatagagagcaattagacatacctgttgct
agattaagaaaaaagatttaa

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