KEGG   Oceanicola sp. D3: FHY55_18250
Entry
FHY55_18250       CDS       T06139                                 
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
ocd  Oceanicola sp. D3
Brite
KEGG Orthology (KO) [BR:ocd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocd03019]
    FHY55_18250 (rapZ)
Messenger RNA biogenesis [BR:ocd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     FHY55_18250 (rapZ)
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_16 Rad17 SKI AAA_27
Other DBs
NCBI-ProteinID: QDC11055
UniProt: A0A5B8BZE4
Position
complement(3637127..3638086)
AA seq 319 aa
MTDDPHATSTPQALPHASAVQRLVLVTGPAGAGRSSAVRVLEDLGYEAIDNLPLSLVPRL
LEAAPRGGALALGIDSRNREFDPPHLLDLLAQLDARPDVAHEVLYLDCLPEVLLRRYSET
RRRHPLAPSESPEEGIRRDFELLAGIRERADVLIDTSDLSVHDLREELDRLFSLEATVRL
GVSIQSFSYKRGLPHGLDMVFDCRFLNNPHWQPDLRPLDGRDAAVARYVEADPRFAEFHK
RVRGLVDMLLPAFVEEGKSHLSIGFGCTGGKHRSVALTERFGKELAGAGWRVSIRHREIE
RRVGARVAEPPAAALGTKA
NT seq 960 nt   +upstreamnt  +downstreamnt
atgactgacgatccgcatgccacttccacgccccaagcgctgccgcacgcgagtgccgtg
caacgcctggtgctcgtgaccgggccagccggggcgggccgcagctcggcggtgcgggtg
ctggaagatctgggctatgaagccatcgacaacctgccgctctcgctcgttccccgcctg
ctggaggccgcgccgcgcggtggcgcccttgcgctggggatcgacagccgcaaccgggag
tttgacccgccgcacctgctcgacctgctggctcagctcgacgcgcgcccggacgtggcc
catgaggtgctttacctcgattgcctgcccgaggtgcttctgcgccgctattccgaaacc
cgccgccgccacccgctcgccccctctgagagcccggaggagggcattcggcgcgatttt
gagctgcttgccggcatccgcgagcgcgccgatgtgctgatcgacacatcggacctgtcg
gtgcatgacctgcgcgaggaactcgacaggctgttttcgctggaggcaacggtgcggctt
ggcgtgtcgatccagagcttttcctacaagcgcggattgccccatgggctcgacatggtg
tttgactgccgcttcctgaacaacccgcactggcagccggatctgcgcccgctggatggc
cgcgacgccgctgtggcgcgatatgtggaagccgacccccgcttcgcggagtttcacaag
cgcgtgcgaggccttgtagacatgttgcttccggcctttgtagaagaaggaaaatcccat
ctgtcgatcggcttcggctgcaccggcgggaagcaccgctctgttgccctgacggaacgg
ttcgggaaagagcttgcaggggccggatggcgcgtgtctattcggcatcgggaaattgaa
cggcgggttggggcacgggtggcagagccaccggccgcagctttggggacgaaggcttga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (8)   

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