KEGG   Oceanimonas sp. GK1: GU3_10885
Entry
GU3_10885         CDS       T01667                                 
Name
(GenBank) AMP-dependent synthetase and ligase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
oce  Oceanimonas sp. GK1
Pathway
oce00061  Fatty acid biosynthesis
oce00071  Fatty acid degradation
oce01100  Metabolic pathways
oce01212  Fatty acid metabolism
oce02024  Quorum sensing
oce04146  Peroxisome
Module
oce_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:oce00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    GU3_10885
   00071 Fatty acid degradation
    GU3_10885
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    GU3_10885
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GU3_10885
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:oce01004]
    GU3_10885
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oce04147]
    GU3_10885
Enzymes [BR:oce01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     GU3_10885
Lipid biosynthesis proteins [BR:oce01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   GU3_10885
Exosome [BR:oce04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   GU3_10885
  Exosomal proteins of breast cancer cells
   GU3_10885
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 AMP-binding_C S-Me-THD_C
Other DBs
NCBI-ProteinID: AEY01933
Position
complement(2363162..2364793)
AA seq 543 aa
MLYHWAEQRPKEIYLRQRREDHWHDHSWGSVLEMAARLVSGLRRLGLKPGDKVALLSKNC
AEWFICDFALQMGGYISVPIYPTAGADTVRYVLEHSESRALFIGKLDDPAAQEPGIPDGL
IRLAMPYATPVETHHHWDSLLVYEPMAERPVPEPDTLMTLVYTSGSTGQPKGVMITHGAY
AAACRGILETTGLNAADRAFSYLPLAHITERVYVLGASLYAGTLVGFAHSLPTFVDDVKT
ISPTVFISVPRLWTNFRSGILEKVPESRLKLLLRIPLLSGLVKKKIRAGLGLDQARILGC
GSAPVSPSLLRWYERLDMPITEAWGMTENLAYSTLNYPFRSDKIGTVGKAGAGVEIRIAD
DGEILCRCAGMMQGYYKNKEATEKTLREGWLHTGDQGRLDDEGYLTITGRLKDAFKTAKG
KYVLPVPIESMLIENSLIEQVCVVGSGQAQPMALVQLAEGGAGQGREQVTSALSETLGHI
NRGLESHQRLGGILVMKEAWTVENDILTPTLKIKRHLLEQQYGDLDQRWPKEQVIVWEQD
LAE
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgttgtatcactgggccgagcagcgcccgaaggagatttacctgcgtcagcgcagggag
gatcactggcatgatcacagctggggttcggtgctggagatggccgcccggctggtgtcg
gggctgcgccggcttggcctgaagccgggagacaaggttgccctgctgtcaaagaactgc
gccgagtggtttatctgtgattttgccctgcagatgggggggtacatcagcgtgcccatt
taccccaccgccggggccgataccgtgcgctatgtgctggagcacagcgaaagccgggcg
ctgtttatcggcaaactggacgatccggcggcccaggagccgggcattcccgacgggctg
attcgcctggccatgccctacgccaccccggtggaaacacaccatcactgggacagcctg
ctggtatacgagcccatggcagaacggccggtacccgagcccgacaccctgatgaccctg
gtctacacctcgggcagcaccggccagcccaagggggtgatgatcacccatggcgcctat
gccgccgcctgccggggcattctggaaaccaccgggctcaacgccgcagacagggccttt
tcctacctgccgctggcccatattaccgaacgggtctacgtgctgggcgccagcctctac
gccggcaccctggtggggtttgcccacagcctgccgacctttgttgacgacgtgaaaacc
atttcccccacggtgtttatctcggtacccaggctgtggaccaatttccgcagcggcatt
ctggaaaaggtgcccgagtccagactgaagctgttgctgcgtattccgctgctgtcgggt
ctggtcaagaaaaaaatcagggccggcctgggccttgatcaggcgcgcattctcggctgc
ggatcggcgccggtgtcgccgtcgctgctgcgctggtacgaacggctcgacatgcccatt
accgaggcctggggcatgaccgagaacctggcctattccacgctcaattatccgtttcgc
tccgacaaaatcggcaccgtgggcaaggccggtgccggggtggaaatccgcattgccgac
gacggcgaaatactgtgccgctgcgccggcatgatgcagggctattacaagaacaaggaa
gccaccgagaagacgctgcgcgagggctggctgcacaccggcgatcagggccgactggac
gacgaaggctacctgaccattaccggccggctcaaggacgctttcaagactgccaagggc
aagtatgtgcttcctgtgcctattgaatccatgttgattgaaaacagcctgatcgagcag
gtgtgtgtggtggggagcggccaggcccagcccatggccctggtgcaactggcggaaggc
ggtgccggtcagggccgggagcaggtgacaagcgccctgtcggaaacgctggggcacatc
aaccgcggcctggaaagccatcagcgactgggcggcatactggtcatgaaagaagcctgg
acggtggaaaacgacattctgacgcccaccctcaagatcaagcgccacttgctggagcag
caatatggggatctggatcaacgctggcccaaggagcaggtgattgtctgggagcaggat
ctggcagaatga

  All links  
Gene (11)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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