KEGG   Ochrobactrum sp. EEELCW01: GTN27_13335
Entry
GTN27_13335       CDS       T07148                                 
Name
(GenBank) UdgX family uracil-DNA binding protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
ocl  Ochrobactrum sp. EEELCW01
Pathway
ocl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ocl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GTN27_13335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocl03400]
    GTN27_13335
Enzymes [BR:ocl01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     GTN27_13335
DNA repair and recombination proteins [BR:ocl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     GTN27_13335
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: QTN04234
Position
2:complement(145431..146054)
AA seq 207 aa
MTVPAITRRQQNLEQVCAEARTCRRCELYQNATQTVFGEGRTGARVFFVAEQPGDKEDIG
GRPLIGPAGRLFDACLNEVGIKRERCYITNAVKHFRHTQRGKRRIHQRPSTSHIEACRWW
LQQEIELVEPHIIVALGAVAARSLFGKPMKIAAIRGIPLEFENHLILVTIHPSYLLRLRA
QSGFDRERAMFLKELAKVAEFERAAET
NT seq 624 nt   +upstreamnt  +downstreamnt
atgacagtaccagcaatcacccgtcgccaacagaatcttgaacaagtctgcgcggaagcg
cggacttgtcggcgttgtgagctctatcaaaatgcaacacagacggtttttggcgaaggg
cgcaccggcgcccgagttttctttgttgccgaacaacctggcgacaaggaggatattgga
ggaaggcccttgattggccctgcaggtcggctcttcgatgcctgcctaaacgaagtcggt
atcaaacgcgagcgatgctatattaccaatgcggtaaaacactttcgacatacacagcgc
ggtaaaagacgcattcaccagcgcccgtcaaccagccacattgaagcttgtcgctggtgg
ctccagcaggaaattgaactggttgaaccccacatcatcgttgcgctgggcgcagttgcc
gcccgttcccttttcggaaagccgatgaaaatcgcagcgatacgcggcatccctctcgag
ttcgagaaccaccttatccttgtgacgatccacccatcctacctgctacgcttacgtgcc
cagagcggctttgatcgcgaacgggcgatgtttctcaaagaactggccaaagtcgcggag
ttcgagcgcgccgccgaaacgtga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (2)   

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