KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139380422
Entry
139380422         CDS       T10872                                 
Name
(RefSeq) actin-related protein 3-like
  KO
K18584  actin-related protein 3
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144  Endocytosis
ocla04517  IgSF CAM signaling
ocla04530  Tight junction
ocla04810  Regulation of actin cytoskeleton
ocla05100  Bacterial invasion of epithelial cells
ocla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    139380422
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    139380422
  09144 Cellular community - eukaryotes
   04530 Tight junction
    139380422
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    139380422
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    139380422
   05100 Bacterial invasion of epithelial cells
    139380422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocla04131]
    139380422
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocla04812]
    139380422
   04147 Exosome [BR:ocla04147]
    139380422
Membrane trafficking [BR:ocla04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    139380422
Cytoskeleton proteins [BR:ocla04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     139380422
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139380422
  Exosomal proteins of other body fluids (saliva and urine)
   139380422
  Exosomal proteins of bladder cancer cells
   139380422
SSDB
Motif
Pfam: Actin MreB_Mbl FtsA Robl_LC7
Other DBs
NCBI-GeneID: 139380422
NCBI-ProteinID: XP_070979182
Position
22:complement(13708962..13727522)
AA seq 414 aa
MAGRLPACVVDCGTGYTKLGYAGNTEPQFIVPSCIAIKESAKVGSRTVKGVDDLDFFIGD
EGIDKPNYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENRE
YTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGY
VIGSCIKHIPIAGRDITYFTQQLLREREVGIPPEQSLETAKAVKERFSYVCPDLVKEFNK
YDTDGSKWIKQYTGINNISKKEFTVDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVI
QNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKMSEELSGGKLKPKPID
VQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
NT seq 1245 nt   +upstreamnt  +downstreamnt
atggcaggacgattaccggcgtgtgttgtcgactgcggtacaggatacactaagctgggg
tatgcagggaacacagagccacagttcattgttccgtcatgtattgcaatcaaagagtcg
gccaaggttggatcaaggacggtcaagggggtggacgacctggacttcttcatcggcgat
gaggggatagacaagcccaattatgccacaaagtggcccatccgtcatggcattgtcgag
gactgggacctgatggagaggttcatggaacaggtgatcttcaagtacctgagggcggag
cctgaggaccactactttctgttgacagagcctcctctgaacacaccagagaaccgagag
tatacagcagagatcatgtttgagtccttcaacgtccctgggctctacattgcagtgcag
gctgtcctggcgctggctgcctcctggacatccagacaggtgggggagaggacactgaca
gggacggtcatcgacagcggagacggagtcacccacgttatccctgtggctgagggctac
gtcatcggcagctgtataaagcacatccccatcgcgggtcgtgacatcacctacttcacc
cagcagcttctgagggagcgggaggtgggcatccccccagagcagtccctggaaacggcc
aaggcagtcaaggagcgtttcagctacgtgtgtcctgacctagtgaaagagttcaacaag
tacgacacggatggctccaagtggatcaagcagtacactggaattaacaacatcagcaag
aaggagttcactgtcgacgtgggctacgagcgcttccttggccctgagatcttcttccac
ccagagtttgccaatcctgacttcacccagcccatctccgaagttgtggacgaggttatc
cagaactgccccattgatgtcagacgtcctctttacaagaacattgttctgtcaggcggc
tccaccatgttcagggactttgggcggcgcctgcagagggacctgaagaggactgtggac
gctaggctgaagatgagtgaggagctgagtgggggcaagctcaagcccaaaccaattgat
gtgcaagtcatcactcatcatatgcagagatatgcagtgtggttcggaggatccatgtta
gcctcaactcctgagttctaccaggtatgccacaccaaaaaggactatgaggagattggg
cctagcatctgtcgtcacaaccctgtgttcggagtcatgtcttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (8)   

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