KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422901
Entry
139422901         CDS       T10872                                 
Name
(RefSeq) uncharacterized protein
  KO
K12484  Rab11 family-interacting protein 1/2/5
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    139422901
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocla04131]
    139422901
Membrane trafficking [BR:ocla04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    139422901
SSDB
Motif
Pfam: C2 RBD-FIP
Other DBs
NCBI-GeneID: 139422901
NCBI-ProteinID: XP_071030464
Position
12:23244819..23280225
AA seq 1618 aa
MSLSDQSRQCYPTSVQVTVVQARSLRIKGKNGTNDAYAIMQVAKDKFATSVAEKSVAPVW
KEEATFELPLFHNGNTEKCTLHVHVMHRALVGPDKLLGQAVINLLELSEVKSRNKTEWHK
LLDKAGKPDKDRGEVQVDIQFMKNNMTASMFDLSATEKPHSRLGRFKDKVRGKKEGLSDT
ASAVVPSFIQVLTDSEGEGEGGTDKGEKKKKNKLKSLFSPKSNLQRHRLSQSMSVLGPLP
EKNSSLSGSRSTGLNVDSSEGKNKFKFQTHKRTSSSLSLGRSKIPAPLAEQSNLCINGTH
MYTEEPQPRSARTGSNFSLASSGHGSMEDLRKAQGRKSSGTSMDSFRALKQPSTWAEEEE
RAMLDEERKKKEEQERKKLDEEERIRKEEQEKSRITEEEGEEMRLEEEQEERSLKVEGEN
SIWKEKWRLEEKRREMEEQERWEEEERIRREEHEIMRREDILRKEDERKMREVEERLKRE
KDERIKEEERIRGEQEEGMQRREEEERKMREEEERLRREQEDILRKIREEERRGKERIKR
AAEEKMKREENRVKEEEEERRRFEEEEEGRMKREAEEGRMKREDDRLKEEEEEKKGRIEA
EEERMKREEDRVRKEEEEEERRRFEEEEEERMKREEDRVRKEEEEEENKRRIEAEEERMK
REEDRVRKEEEEEERMRFEEEEEERMKREEDRVRKEEEEEERRRRFEEEEGRMKREEDRV
RKEEEEEERRRFEEEEEERMKREEDRVSREEEEEERRRRFEEEEGRMKREEDRVSREEEE
EERRMRIEEEEGRIKREAEEERMKREEDRLRKEEEEERRRRIEEEERVRKTAEEDWLREE
MGIKRMEEDKIIKREEEDRLRKEEELRKIREKEERLRREEEDDMRRNEEEQRKMKNEEER
RIEQEMLRKEEAERTRIEEEREEDRRRDEEQGKLMEAKERFRVDVENMKKEDLRGQEEEM
TEKEKKRNAQMEKKRRHEEVRVKLDKVEQPMKQNREAESIVCNNPFEEVSPTTSCDDNSS
NILFEETPTTSPTGSISCRTNKVSAVKQRPSSCVNPSQPSVSSNPFLSFLSPEIEIYMDS
PRGDWETRGTQDPSTDIMEKKDPAPLPLNQRWARMDNWPSKGNAQSVTVNLARTKPTKQP
PPPIRQSSTSLVGCGDNQESVSGQDHSSIRMDKGPAPDRPSQAPSQTQRDQSMTRVNLGH
KDIGASMSKVSQRVVQIITPLRFSSTATTEHTSGGQSSTHHGNQPEQEMPSATGGLRVAK
HNKGPAPSRPQYPPGKTMPKVDVIDKQLNTEEHDSLVEFDPNNPFAEDCRMEKSSGHGEE
QRLTGEYQESLDSPNHQSCTSIEANPGSMQNSVVRDSMELPTPDVLLAEDGFRPIKNSLA
ELVFVPLLPLKKTSISREEDTGKQSSVKLQTPGASSLSKLSSSISEKLQNRGVGMALTCV
TIAQPPCVPSPAPAILTQPKPLKGSGGRSNCPPQTSSLPGQRTLLQARAMSSVAEHCSGE
EAGGRGDRPTSSTRRPHPVKPLSSLENQPASNIQERQAGISTGILGVLQEKIKVKDTGVK
GQYSQLTQEELISLVVKQQDQLSKRDNKIKELEQYIDNLLVRIIEEQPSILMSMNSLK
NT seq 4857 nt   +upstreamnt  +downstreamnt
atgtctctatcagaccagagccgacagtgttatccaaccagtgtacaggtaactgtggtt
caggcaagaagcctgaggataaaggggaaaaatggcaccaacgacgcatacgccatcatg
caggtggccaaggataaattcgctacatcggtggcagagaagagcgtggcaccggtgtgg
aaagaagaggccacgttcgagctgccgctcttccacaacggtaacacagaaaagtgtacg
ttgcacgtccacgtaatgcaccgggctctcgtgggacctgacaagttgctcggccaagca
gtcatcaacctgttggagctcagcgaggttaaatcccgtaataagactgaatggcataaa
ctgctggacaaggcaggcaagccagacaaagaccggggagaggtgcaggtggacatccag
tttatgaagaataacatgacagccagcatgttcgacctctctgctacagaaaagccgcac
tcccgcctgggaaggttcaaggacaaggtgcgaggcaaaaaggagggtctgtcggacact
gcgtctgccgtggtaccgtccttcatccaggttctgacggacagcgagggggagggagag
gggggtacagacaaaggagagaaaaagaagaaaaacaagctgaagtctctgttttctccc
aagtctaacctgcagcgtcacagactgtctcagtctatgtctgtcctgggccctctgcct
gagaagaactcctcattgagtggcagccgctccacaggcctcaatgtggactcctctgaa
ggtaaaaataaattcaagtttcagacccataagcgcacaagcagttctctgtccctaggg
cgctctaagattcctgccccgcttgcagagcagagtaacctgtgcatcaacggcactcac
atgtacacagaggagccccagccccggagcgcccgcaccggctccaactttagcctggcc
agctcaggccatggctccatggaagacctgcgcaaggcccagggtcgtaagagctccggc
acctccatggactccttcagggccctgaagcagccttcgacctgggcagaggaagaagag
agggctatgttggatgaggagaggaagaaaaaggaagagcaggagaggaagaagttagac
gaggaagagaggataaggaaggaggaacaagagaaaagcaggattacggaggaggagggg
gaagaaatgaggctagaagaggaacaggaggagaggagtctgaaggtggagggagagaac
agcatttggaaggaaaagtggaggttagaggagaaaaggagagaaatggaggaacaagag
aggtgggaagaagaggaaagaattaggagagaagaacatgaaataatgaggagggaggat
atactgagaaaggaggacgagaggaaaatgagggaggtggaggaaagattgaagagggag
aaagatgagaggataaaggaggaagaaaggattaggggagaacaggaggagggtatgcaa
agaagagaggaagaggagaggaagatgagggaggaggaagaaagactaaggagggaacag
gaggatatactgagaaaaataagggaggaggaaaggaggggtaaagaaagaataaagaga
gcggctgaagaaaaaatgaagagagaggaaaacagagtgaaggaggaggaggaagaaagg
aggaggtttgaggaggaggaagaaggaagaatgaagagagaggctgaagaaggaagaatg
aagagagaggatgataggctgaaggaggaggaagaagaaaagaaggggaggattgaggcg
gaagaagaaagaatgaagagagaggaggacagagtgaggaaggaggaggaggaggaagaa
aggaggaggtttgaggaggaggaagaagagagaatgaagagagaggaggacagagtaagg
aaggaggaggaggaagaagaaaataagaggaggattgaggcggaagaagaaagaatgaag
agagaggaggacagagtgaggaaggaggaggaggaggaagaaaggatgaggtttgaggag
gaggaagaagagagaatgaagagagaggaggacagagtaaggaaggaggaggaggaggaa
gaaaggaggcggaggtttgaggaggaagaaggaagaatgaagagagaggaggacagagtg
aggaaggaggaggaggaggaagaaaggaggaggtttgaggaggaggaagaagaaagaatg
aaaagagaggaggacagagtgagtagggaggaggaggaggaagaaaggaggcggaggttt
gaggaggaagaaggaagaatgaagagagaggaggacagagtgagtagggaggaggaggag
gaagaaaggaggatgaggattgaggaggaagaaggaagaataaagagagaggctgaagaa
gaaagaatgaagagagaagaggataggctgaggaaggaggaggaggaagaaaggaggagg
aggattgaggaggaagaaagagtgaggaagaccgcagaggaagattggctgagagaggaa
atggggataaagaggatggaggaggacaaaataattaagagagaagaggaggataggctg
agaaaggaggaagagctgaggaagattagggaaaaggaagaaaggctaaggagggaggaa
gaggatgatatgcgtagaaatgaagaagagcagaggaagatgaagaatgaggaggaaagg
agaatagagcaggagatgttgagaaaggaagaagcagaaagaacgaggattgaagaggaa
agggaagaggatagaagaagagatgaggagcagggaaaactgatggaggcgaaagagagg
tttagggtggatgtagaaaatatgaaaaaagaggatttgagaggacaggaagaagagatg
acagagaaggagaaaaagaggaatgcacagatggagaaaaagcgaaggcatgaggaggtg
agagtaaagttggacaaagttgaacaaccgatgaagcagaatagagaggcagaatccatc
gtgtgcaataatccttttgaggaagtctctcctaccacttcatgtgatgacaactcttca
aatatcctgtttgaggagacccccacaacctctcctactggttccatcagctgccgaaca
aataaagtatcagcagtcaagcagagaccctcttcatgtgtgaacccttctcagcctagt
gtgtcttccaaccccttcttatcgttcttgtctcctgaaattgagatttatatggactcc
cctagaggcgattgggaaaccagaggcacccaggacccgtctactgatataatggagaag
aaagaccctgcccctctgcccctcaaccagcgctgggctcgtatggacaactggcctagc
aagggcaacgctcaatctgtcaccgtgaatctcgcccgaacaaagccaacaaaacagcca
cctcctccaatacgccaatcttccacatcactggtgggatgcggggataaccaggagagt
gttagtggtcaggaccattccagtatcaggatggacaagggtcctgctccagatagacca
agccaggctccaagccagacacagagggaccagagtatgactagagtgaacctgggacat
aaggacataggtgcctccatgtccaaggtctctcaacgtgtagtacagattatcacacca
ctgagattttcctccacagctacaacagaacacacaagtggaggccagagctctacccac
catgggaaccaaccagaacaagaaatgccatctgccactggggggttgagggtggctaaa
cacaataaaggtccagcaccttctaggccccagtaccctccagggaagacaatgccaaaa
gttgatgtaatagataagcaattgaatactgaggaacatgactctttggttgagtttgat
ccaaataatccctttgcagaagactgcagaatggagaagtcctctggacatggtgaagaa
cagagactaactggtgaatatcaggagagcctagactctcccaatcatcagagttgtacc
tccatagaagcaaatccaggttcaatgcagaatagtgtggttagggactcaatggagctt
ccaacgccagatgttctgctagctgaggatggcttccgtcccatcaaaaactcattagca
gagctggtctttgttcccttgcttccattgaagaaaacatccatctctagagaggaggat
actggtaaacagagttctgtaaaactacaaaccccaggggcttcctctttgagtaagctt
tcctcaagtatctcagaaaaactgcagaatcgaggtgtgggtatggcactaacttgtgtt
accattgcccagcccccatgtgtaccctcacctgcccccgccatcctaacccaacccaag
cccctgaagggatcagggggcaggagtaactgtcctccccagacaagctctctccctggc
cagaggaccctgcttcaggctagagctatgtcctccgttgcagagcattgcagtggagag
gaagcgggagggagaggggacaggcctacctcaagcacacgcaggccccatccagtaaag
cctttgagctccctggaaaaccagccagcctccaacatccaggagaggcaggctggcata
tctacaggaatcctcggtgtccttcaagagaagataaaggtcaaagacacaggggtcaaa
ggtcagtactcccagctgacccaggaggagctgatctccctggtggtgaagcagcaggac
cagctctccaagagggacaacaagatcaaggagctggagcagtacattgacaacctgctg
gtgcgcatcattgaggagcaacccagtatcctgatgtccatgaactcactcaaatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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