KEGG   Ochotona curzoniae (black-lipped pika): 121161680
Entry
121161680         CDS       T11174                                 
Symbol
TUBB1
Name
(RefSeq) tubulin beta-1 chain isoform X1
  KO
K07375  tubulin beta
Organism
ocz  Ochotona curzoniae (black-lipped pika)
Pathway
ocz04145  Phagocytosis
ocz04517  IgSF CAM signaling
ocz04540  Gap junction
ocz04814  Motor proteins
ocz05010  Alzheimer disease
ocz05012  Parkinson disease
ocz05014  Amyotrophic lateral sclerosis
ocz05016  Huntington disease
ocz05020  Prion disease
ocz05022  Pathways of neurodegeneration - multiple diseases
ocz05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ocz00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    121161680 (TUBB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    121161680 (TUBB1)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    121161680 (TUBB1)
  09142 Cell motility
   04814 Motor proteins
    121161680 (TUBB1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121161680 (TUBB1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    121161680 (TUBB1)
   05012 Parkinson disease
    121161680 (TUBB1)
   05014 Amyotrophic lateral sclerosis
    121161680 (TUBB1)
   05016 Huntington disease
    121161680 (TUBB1)
   05020 Prion disease
    121161680 (TUBB1)
   05022 Pathways of neurodegeneration - multiple diseases
    121161680 (TUBB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ocz03036]
    121161680 (TUBB1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocz04812]
    121161680 (TUBB1)
   04147 Exosome [BR:ocz04147]
    121161680 (TUBB1)
Chromosome and associated proteins [BR:ocz03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     121161680 (TUBB1)
Cytoskeleton proteins [BR:ocz04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    121161680 (TUBB1)
Exosome [BR:ocz04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   121161680 (TUBB1)
  Exosomal proteins of colorectal cancer cells
   121161680 (TUBB1)
  Exosomal proteins of bladder cancer cells
   121161680 (TUBB1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_2 Tubulin_3
Other DBs
NCBI-GeneID: 121161680
NCBI-ProteinID: XP_040844158
Position
Unknown
AA seq 445 aa
MREIVHIQIGQCGNQIGSKFWEVIGEEHGIDPAGSDCGASTLQLERINVYYNEAYGRKHV
PRAVLVDLEPGTMDSIRSSRLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELLESVLDVV
RRESESCDCLQGFQVVHSLGGGTGSGMGTLLMNKIREEYPDRILNSFSVMPSPKVSDTVV
EPYNAVLSVHQLIENTDACFCIDNEALYDICFRTLKLTTPAYSDLNHLVSLTMSGITTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM
AACDPRRGRYLTVACIFRGRMSTKEVDQQLLSVQTRHSDCFVEWIPNNVKVAVCDIPPRG
LNMAATFIGNNTAIQELFRRVSEQFSAMFKRKAFVHWYTSEGMDIDEFGEAESNIHDLVS
EYQQFQDATALQEENEGADGEAEME
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgcgtgagatcgtccacattcagattggccagtgcggcaaccagattgggtccaagttc
tgggaggtgatcggcgaggagcacgggatagacccggcaggcagcgactgtggggcctcc
accttgcagctggagagaatcaacgtgtactacaatgaagcctacggtaggaaacacgtg
ccccgagcagtcctggtggacctggagccggggacgatggacagcatccggtccagcaga
ctgggggccctctttcaacccgacagttttgtgcatgggaactcgggggctggcaacaac
tgggccaagggccattacacggagggcgcggagctgctggagagcgtgctggacgtggtg
aggcgcgagagcgagagctgcgactgcctgcagggcttccaggtggtccactcgctgggc
gggggcacaggctcgggcatgggcaccctgctcatgaacaagatccgcgaggagtacccg
gaccgcatcctcaactccttcagcgtcatgccctcgcccaaggtgtcggacaccgtggtg
gagccctacaacgcggtgctgtcggtgcaccagctcatcgagaacacggacgcctgcttc
tgcatcgacaacgaggccctctatgacatctgcttccgcacgctcaagctcaccacgccc
gcctacagcgacctcaaccacctggtgtccctcaccatgagcggcatcaccacctcgctg
cgcttccccggccagctcaacgccgacctgcgcaagctggccgtgaacatggtgcccttc
ccgcgcctgcacttcttcatgccgggcttcgcgccgctcaccgctcagggcagccagcag
taccgcgccctgtcggtggccgagctcacccagcagatgtttgatgctcgcaacaccatg
gccgcctgcgacccccgccgtggccgctacctcaccgtggcctgcatcttccggggccgc
atgtccactaaggaggtggaccagcagctgctgtctgtgcagaccaggcacagcgactgc
ttcgtggagtggatccccaacaacgtcaaggtggccgtctgcgacatccctccccggggg
ctcaacatggctgccaccttcataggcaacaacacggccatccaggagctcttccgcagg
gtgtccgagcagttctcggccatgttcaagaggaaagccttcgtgcactggtacactagc
gaagggatggacattgacgagtttggggaggctgagagcaacatccatgacctggtatcc
gagtaccagcaattccaggacgccacagcgctccaggaggaaaacgagggggccgatggg
gaggcagaaatggagtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system