KEGG   Orrella dioscoreae: ODI_R1811
Entry
ODI_R1811         CDS       T05133                                 
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
odi  Orrella dioscoreae
Brite
KEGG Orthology (KO) [BR:odi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:odi03009]
    ODI_R1811
Enzymes [BR:odi01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     ODI_R1811
Ribosome biogenesis [BR:odi03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    ODI_R1811
SSDB
Motif
Pfam: Methyltr_RsmB-F RsmF-B_ferredox Ubie_methyltran Methyltransf_31 Methyltransf_25 MTS Methyltr_RsmF_N FtsJ
Other DBs
NCBI-ProteinID: SOE49049
UniProt: A0A1C3K1A6
Position
I:1971051..1973204
AA seq 717 aa
MSTRKPSDAPRRGGSLSAFKAARDTSGRESSPRAPSRPAPRDDAAAPAPRRSAGLPPPAQ
ARGDRPVRENRQERPARGEWENRQPRDGRPAGDSRPPRDGRPSYDNRPPRDNRASGDSRG
NWEPRGGQDASRGRPERGNDRGRDERYGGDRNDRGGNSHGGNDRNRNDRGGASRGGPPQS
PRAAMPPARGAWTAPRNVDAAEQRDFASRAAAPQDAKPAAPQRPRLAPAAWRLEQLRDVL
ETVLTWEYPADASLSHWLRAHPKLGVRDRAELAEAVYDILRNLRRYRQFGESGVGHAVRR
LAILGLYNTGNAEAVKAVLTPPEQEWLARVTSIDLDTLPPAVRDSLPDWLDERLALLPDA
QPLRESLNQQADLDLRVNPMKAERDEMLAALVKGMPQHNPRPTPYSPWGIRMSGRPPLNR
WPQFEHGLIEVQDEGSQLLAALVAPKRGEMVIDFCAGAGGKTLLLGALMRSTGRLYAFDV
SAARLARGKPRLARSGLSNVVPVAIDGENDVRVKRLAGKAQRVLVDAPCSGMGTLRRNPD
LKWRQSVQALHELCALQKRILESAARCVAPGGRLIYATCSLLPEENEEQVRAFLARHPEF
VQRDAGEILAARAPDLTLDGPFLKLRPDVHGTDGFFAAVLERVKPASGKGGAEAAAGVAA
AAQAEAVIEAASAAASETLDEQAPGGETADAEPGEAPDEAAPVADAGEQPDAPPRDA
NT seq 2154 nt   +upstreamnt  +downstreamnt
atgagcacccgtaaaccctctgacgccccgcgccgcggcggcagtctgtccgccttcaag
gccgcccgcgacacctccgggcgcgagtcttcgccgcgcgcgccatcccgtccggcgccg
cgtgatgacgccgccgccccggccccccggcgcagcgccggcctgccgccgcccgcgcag
gcgcgtggcgaccgtcccgtgcgcgagaaccgccaggagcggccggcgcgcggcgaatgg
gaaaaccgtcagccgcgcgatggccgtcccgctggcgacagccgtccgccacgcgatggc
cgtccttcgtacgacaaccgccccccgcgtgacaaccgtgcgtccggcgacagccgtggc
aactgggagccgcgtggtggccaggacgcctcgcgtggccgcccggaacggggcaacgat
cgtggtcgcgatgagcgctacggtggcgaccgcaatgaccgtggtggcaacagccacggc
ggcaatgaccgtaaccgcaacgaccgcggcggcgccagccgtggcggtcctccccagtcg
ccgcgcgcggccatgccgcccgcgcgcggcgcctggaccgcgccgcgcaacgtcgacgcc
gccgagcagcgcgacttcgcgagtcgcgccgccgcgccccaggacgccaagcctgccgcg
ccgcagcgtccgcgcctggcccccgccgcctggcgtctggagcagttgcgcgacgtgctg
gaaacggtgctgacctgggaatacccggccgacgcctcgctgtcgcactggctgcgcgcg
catcccaagctgggcgtgcgtgaccgcgccgagctggccgaggcggtctacgacatcctg
cgcaacctgcgccgttaccgccagttcggcgaaagcggcgtgggccacgccgtgcgccgc
ctggccatcctgggtctctacaatacgggcaacgccgaggcggtcaaggccgtgctcacg
ccgcccgagcaggagtggctggcgcgcgtcaccagcatcgacctcgatacgctgccgccc
gccgtgcgcgacagcctgcccgactggctggatgagcgcctggcgctgctgcccgacgcc
cagcccctgcgcgagtcgctgaaccagcaggccgatctggacctgcgggtcaatcccatg
aaggccgagcgcgacgagatgctggccgcgctggtcaagggcatgccgcagcacaatccg
cgtcccacgccgtattcgccctggggcatccgcatgtcgggccgcccgccgctgaatcgc
tggccgcagttcgagcatggcctcatcgaggtccaggacgaaggcagccagctgctggcc
gcgctggtcgcgcccaagcgcggcgaaatggtcatcgatttctgcgccggcgcgggcggc
aagacgctgctgctgggcgcgctgatgcgctccaccggccggctctatgccttcgacgtg
tcggccgcgcgcctggcccgcggcaagccgcggctggcccgcagcggcctgtccaacgtg
gtgcccgtggccatcgacggcgagaacgacgtgcgcgtcaagcgcctggccggcaaggcc
cagcgcgtgctggtcgacgcgccgtgcagcggcatgggcacgctgcgccgcaatcccgac
ctgaagtggcgccagagcgtgcaggccctgcatgagctgtgcgcgctgcagaagcgcatc
ctggaaagcgccgcgcgttgcgtggcgccgggcggacgcctgatctacgccacgtgcagc
ctgctgcccgaggaaaacgaggaacaggtgcgcgccttcctggcccgccatcccgagttc
gtgcagcgcgatgccggcgagatcctggccgcgcgcgcgcccgatctcacgctggatgga
ccgttcctgaagctgcgtcccgacgtgcatggcacggatggcttcttcgccgccgtgctg
gagcgtgtgaagccggcatccggcaagggcggggccgaggcggctgccggcgtggcggcg
gccgcgcaggccgaggcggtgatcgaggctgccagcgcggcagccagcgagaccttggac
gagcaagccccgggtggggagacggcggacgccgaacccggcgaggcgccggatgaggcc
gcgccggtggcggatgccggcgaacagccggatgcgccgccccgcgacgcctga

  All links  
Gene (53)   
   RefGene (51)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (62)   

Download RDF
DBGET integrated database retrieval system