KEGG   Osmerus eperlanus (European smelt): 134026368
Entry
134026368         CDS       T10927                                 
Symbol
rab11fip5a
Name
(RefSeq) mucin-2 isoform X1
  KO
K12484  Rab11 family-interacting protein 1/2/5
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:oep00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    134026368 (rab11fip5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oep04131]
    134026368 (rab11fip5a)
Membrane trafficking [BR:oep04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    134026368 (rab11fip5a)
SSDB
Motif
Pfam: C2 RBD-FIP DUF4635 TRAPP
Other DBs
NCBI-GeneID: 134026368
NCBI-ProteinID: XP_062325035
Position
9:5333813..5349645
AA seq 1452 aa
MSSLNVDDDQRWVPTHVQVTVLRGRGLRAKGKHGTSDVYTIIQVGKEKYSTCVVEKTTSP
EWKEECSFELLPGVLEDGGRSAYPPGSSDVILTVMHRALIGLDVFLGQAVIPLDKAFQDN
ICMRNEWYKLNSKTGKKEKERGDIQVTIQFTRNNLTASMYNLSIKDKQRSAFGKLKDRMR
GKKRSSEEDSSSAALPAGYGTLRTRLPSDGGGEEEYEDDEGGEGRRSKMRNFFLRGKLRK
SSDTRSSTSLGSESSESSSRGGSLSPTAGISVVVSDLSNSPSNSSNLTDNSPEHTAGTSP
QLSPHKCDLSQETGEISFPVPPPPVNGNHVYDSQSQVAVSEEGSVSLRPLQKSLPLSVSL
QNLRARAEAPGGGRAADGRRWSFDKAGDEEKAAIAAALELAGVALGEEERLLERVAATTL
AAVEADSQGRKQGRNVFAHRREESAGEQSRDESEQARGPAEEKQKGWFGSKDSHSKPSLM
VSTKLEPSSESPTTPHPPAPLLTPSSVSLGTLRHTNPFCPSQSPPTPMSPSNPFLPLLQC
NPFYEDILADKAINPALPPLPYPSSSTPRPPPPPPSSSPSNPNPTLLGERPLTEGHCGKE
ASVTVRKRPLPPIPSEDNNLTVQRSSNPFSPSGRAAVGQEVVWDDSFEAFAANRLKSPEE
ADRHCGPQDTAGTHTTHPLLDAAAGPWTRDSHTHHSHLNVNSALHPSPTAGATLMASTSS
SSPEGNTNHMKLLHTQQHDMSAHLSPAQNGLEAHLDGSKTTNPAATSPELMSGCETKHII
LTANTVEMSTNAHEHPNTHPSFSSPSPRAGLELEHIKVTSSPGPVGVDRLVEEEVTSSPG
PVGVDRLVEEEEEITSSPGPVGVDRLVEEEVIPSPGPVGVDRLVEEEITSSPGPVGVDPT
SSETGSTAPVSFEPRLGVPSPQRPGEKREKNPNLEMKDSVAGSAEDAKLSISVTTDDVEA
NASVSDDDHSLTTPLFYIMTSSPGDGGPLKSSPLSMASGMPSVIQGPPKPARLFSNSLNT
SQIRTSPSQGFDGVLLNPRVLDLSPGTPNILYESADSQQYQSCHSQQSSRASSLSGEGHR
METLPPTLPSQSGEEVDCEVGALSWPVTGCKNTVPWELEEEEEQSEGCRVSGNVHIQSEA
SSLVRMSADEERDAALQPRFLLEDCLSEPHLETHSGAPSDGSRSPPGAEKEGGRGTQAVG
SGDQCSEHSPLQPGALHRSLSEGTVTAGLQDLSSSFGSDPGVNLDTSSVRPDPSLPASPN
PCPLTASSSTSAPPSLPVPATLRSSVSLALPTACVPAAIGAPHAAMLPPDTQQAANQENS
PHAVKPLSVPAEEKGRSALASGLEKLRSTIHPGRSGQLAGPEPERRKSLTEGAGSYYHLT
HSELVSLLLRREADLERQRAEFERQGTLLGRREAELRRLKPQVRDLEDYIDTLLVRIMEQ
TPTLLQVRTKLK
NT seq 4359 nt   +upstreamnt  +downstreamnt
atgtcctccctaaatgtagacgacgatcagagatgggtgcctacacacgtccaggtgaca
gttctgcggggcagggggttgcgagccaagggcaaacacgggaccagcgacgtctacacc
attattcaggtggggaaggagaagtactcgacttgtgtggtggaaaagaccacctctccc
gaatggaaagaggaatgttctttcgagttgttaccgggggtgttggaggatgggggacgg
agcgcataccccccggggagcagcgatgtgatcctcacggtgatgcaccgggcgcttatc
ggtctggatgtgtttctcggacaagctgtgatcccactggataaggcctttcaggacaat
atatgcatgagaaacgagtggtacaagctcaactccaagacagggaagaaggagaaggag
agaggagacatccaggtcaccatccagttcacccgcaacaacctgacggccagcatgtac
aacctctccatcaaggacaagcagcgctccgcctttggcaagctgaaggaccgcatgagg
ggcaagaagaggagcagcgaggaggactcctcctccgccgccctgcccgcgggctacggg
acgctgcggacgcgtctgcccagcgacggcggcggcgaggaggagtacgaggacgacgag
ggaggcgaggggcgccgcagcaagatgaggaacttcttcctgagggggaagctgcggaag
tcgtcggacacgcgctccagcacgtcgctgggctcggagagcagcgagtcgtcgtcacgc
ggtggcagcctcagccccacggcaggcatcagcgtggtggtgtcagacctgtctaactcg
cccagcaacagcagcaacctgaccgacaacagccctgagcacacggccggtacttcgccc
cagctgtcgccacacaagtgcgacctcagccaggagaccggcgagatctccttccccgtg
ccgccgccgcccgtcaacggaaaccacgtgtacgacagccaatcccaggtggcggtctcg
gaggaaggctccgtgtctctgcggccgctgcagaagtctcttccactgtctgtgtcgctg
cagaacctgcgtgcccgggccgaggcgccgggcggggggcgggcggcggatggccggcgc
tggtcgtttgacaaggcgggcgatgaagagaaggcggccatagcagcggcgctggagctg
gcgggcgtggcgctgggggaggaggagcggctcctggagcgggttgccgccaccaccctc
gccgccgtggaggccgacagccagggcaggaagcaggggaggaacgtgttcgctcacagg
agggaggagtctgcgggagaacagagccgggacgagtcggagcaggcccgcggccctgcc
gaggagaagcagaaaggctggttcggatcaaaggactcccacagcaaacccagcctgatg
gtgtccactaaactagagcccagctcagagtcccccaccaccccacaccctcctgccccc
ttgctaactccttcctctgtctccctggggaccctacgtcacactaaccccttctgcccc
tcacagagcccccccacccccatgtccccctccaaccccttcctccccctcctgcagtgt
aaccctttctacgaggacattctggctgacaaggctataaatccggctctgccccctctg
ccttacccctccagctctacccctcgcccccccccaccgcccccctcctccagccccagt
aaccctaaccccaccctgctcggagaacgtcccctcacagaggggcactgcgggaaggaa
gctagcgtcacagtcaggaaacgacccctcccgccgatcccgtccgaggacaacaacctg
accgtccagagatcgtccaatcccttctccccgtctggcagggctgcggtgggacaggaa
gtcgtgtgggacgactccttcgaagctttcgctgcgaacaggttgaagtctccagaggaa
gctgacaggcactgcggcccacaggacacggcggggacgcacacaactcaccctctgctg
gacgcagcggctggaccctggactagagacagtcacacgcatcactcgcatctgaatgta
aactctgctctccacccctcccctactgccggtgccactctgatggcatccacatcctcc
tcctcacctgagggaaacaccaatcacatgaagctcctgcacacacaacaacatgacatg
tcagctcaccttagcccagcccagaacggccttgaagcacaccttgatgggtcaaagacc
actaatcctgctgctacctcacctgagctgatgtcagggtgtgagaccaagcatattatc
ctcactgccaacactgttgagatgtccactaacgcacatgaacatcccaacacacaccca
tcattcagctccccaagcccacgtgcaggcctggagttggagcacataaaggtcacctcc
agccctggtcctgtaggagtagacaggctggtggaggaggaggtcacctccagccctggt
cctgtaggagtagacaggctggtggaggaggaggaggaaatcacctccagccctggtcct
gtaggagtagacaggctggtggaggaggaggtcatccccagccctggtcctgtaggagta
gacaggctggtggaggaggagatcacctccagccctggtcctgtaggagtagatcccaca
tcttctgagacaggctctacagccccagtctccttcgagccaaggctgggggttccatct
ccacagaggcctggagagaagagagagaagaaccctaacctagaaatgaaagattcagtt
gctggttctgcagaggatgctaagctttccatctccgtcacaacggacgatgttgaggca
aacgcttccgtttcagatgatgaccactctttgaccacacccttgttttatatcatgacc
tcctcccctggcgacggtggccctctgaagtcatctcctctcagcatggcctcagggatg
cccagcgttatccagggtcctcccaaaccagccaggctcttcagcaactccctcaacacc
agccagataagaaccagtcctagccaaggcttcgatggcgtgctgttaaaccccagagtg
cttgacctgagccctggcactcccaacattctgtacgagagtgctgactcacagcagtac
cagtcctgccactcccagcagtcctccagggcctctagcctctcaggtgagggacacagg
atggagacgcttcccccaacactcccctcccagagtggggaggaagttgactgcgaggtg
ggggctttgtcttggcctgttactggctgcaagaacacagttccctgggagctggaggaa
gaggaggagcagtctgagggttgtagggtgtctggtaacgttcacatccaatcggaagca
tccagtcttgtcaggatgagtgcggatgaggagagagacgcagctctccaaccacgtttc
ctgctcgaggactgcctttcggaacctcatctagaaacgcactccggagcacccagcgac
gggagccgctcaccgcccggggctgagaaggaaggaggaagggggacccaggctgtcggg
tcaggtgaccagtgttcagaacactctcctcttcagcccggggcgctccatcgctccctc
tccgagggcacggtcacggctggtctccaggatctgtcatcctcgttcggtagcgacccc
ggcgtgaacctggacacctcctctgtccgacctgacccctcccttcctgcctctcccaac
ccctgtcctctaaccgccagtagctccacctcagctcctccctccctccctgtccctgcc
acgctgaggtcatcagtcagcctggccctgcccactgcctgtgtccccgctgcgattggt
gcaccgcatgctgccatgctgcccccggacacacagcaggcagccaatcaggagaacagc
ccccatgctgtgaagcccctgagcgtgccggcggaggagaaaggccgctcggcgttggcc
agcggcctggagaagcttcgatccaccatccacccggggaggagcggacagctggccggg
ccggagccagagaggaggaagtcgctgacagaaggggcggggtcctactaccacctgacc
cacagcgagctggtgtcgctgctgctgcggcgggaggcggatcttgagaggcagagggcg
gagtttgagcgccagggcaccctgctggggcggagggaggcggagctgcgccggctgaag
ccccaggtgagagacctggaggactacatcgacacgctgctggtccgcatcatggagcag
acacccaccctgctgcaagtacgcaccaagctcaagtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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