KEGG   Oxalobacter formigenes: BRW83_0291
Entry
BRW83_0291        CDS       T04835                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
ofo  Oxalobacter formigenes
Brite
KEGG Orthology (KO) [BR:ofo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ofo03032]
    BRW83_0291 (gyrB)
   03400 DNA repair and recombination proteins [BR:ofo03400]
    BRW83_0291 (gyrB)
Enzymes [BR:ofo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BRW83_0291 (gyrB)
DNA replication proteins [BR:ofo03032]
 Prokaryotic type
  DNA Topoisomerases
   BRW83_0291 (gyrB)
DNA repair and recombination proteins [BR:ofo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BRW83_0291 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook Toprim_4 HATPase_c_3
Other DBs
NCBI-ProteinID: ARQ45060
Position
complement(281346..283838)
AA seq 830 aa
MSQNSQNDVQQNEENYGVSSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSID
EALAGFCTEIHVTLHADNSVSVVDNGRGVPTGIKFDDKNTPRRSAAEIVMTELHAGGKFD
QNSYKVSGGLHGVGVSCVNGLSTLLKLTIWRDGKEHYMEFAQGLPQNNSVEMINGVECSP
IKIVGVSDKQGTRVQFWPDPTIFTTIEFQYEVLARRIRELSFLNNGVRIRLTDQRTGKEE
IFAYEGGTRGFVEYINRGKSVLHPTIFQATGERMSELGTPIYVDISMQWNDSYNEQVLCF
TNNIPQRDGGTHLTGLRAAMTRVINRYIEENELAKKAKVDVTGDDMREGLTCVLSVKVPE
PKFSSQTKDKLVSSEVRGPVEEIITKTLTDFLQEKPNDAKIICSKIVEAARAREAARKAR
ELTRRKGVLDGLGLSAKLADCQEKDPSMCELYLVEGDSAGGSAKQGRDRKFQAILPLRGK
VLNVEKSRYEKMLSSEQITTLIATLGTSIGPDEFNIDKLRYHRIIIMTDADVDGAHIRTL
LLTLFYRQMPQLVERGYVYIAQPPLYKIKNGKDERYLKDDLEEANHMMSIALQGASLTPR
EGAEPIAGEQLKEMADQHTIAYNIIQRISRMIDMDVLSAIMNGAKLNLNSMEEAEQSARS
LAKIINDPTVEVNVENNENGDIALSVIKTHYGNAHVTRLDKDFVYGNDYRTLEKTATAFL
NLIGPGAMITRGEGDRMRQLAVKNFHQAMQWLRSEAERGISKQRYKGLGEMNPDQLWETT
MDPTMRRLLKVKIEDAITADQIFTTLMGDNVEPRRAFIENHALLAGNIDV
NT seq 2493 nt   +upstreamnt  +downstreamnt
atgtcgcaaaattcacaaaacgatgttcagcagaacgaagaaaactatggcgtttcctcc
attcagattctggaaggcctggaagctgttcgaaaacggcccgggatgtatatcggcgat
acgtcggatggtaccggtctgcatcatctggtttttgaagtgctggataactcgatcgat
gaagcccttgccggtttctgtacagagatccacgtcacgctgcacgcggataattccgta
tccgtggtcgataacggccgtggcgttccgaccggtatcaaatttgacgataaaaacaca
cccagacgcagcgctgccgaaatcgtcatgactgaactccatgccggaggcaaattcgac
cagaactcgtacaaggtttccggtgggctgcatggcgtcggcgtttcctgcgtcaatggc
ctgtccaccctgttgaagctgaccatctggcgcgacggcaaagagcattacatggaattt
gcacagggactcccgcaaaacaattccgtcgagatgatcaatggcgtcgaatgctcgcca
atcaagattgtcggggtatccgacaaacagggcacacgcgtccagttctggcctgacccg
acgattttcacgacaatcgagttccagtatgaagttctcgcccgaagaatccgtgaattg
tcgtttttgaacaatggcgtccgtattcgcctgaccgaccagcgtaccggcaaggaagaa
atttttgcctacgaaggcggcacgcgcggattcgtcgaatatatcaatcgcggcaaaagc
gtcttgcaccctacgatttttcaggcaaccggcgaacggatgtccgagttgggaacaccg
atttacgtcgatatttcgatgcaatggaacgattcgtacaacgaacaggtgctttgtttc
acgaacaatattccgcagcgtgatggcggtacccatctgaccggcctgcgtgccgcgatg
acacgcgttatcaaccgctacatcgaggaaaacgagctggccaaaaaagccaaggttgac
gttaccggcgacgatatgcgtgagggactcacctgtgtgctttcggtaaaagtcccggaa
ccgaaattcagctcccaaacgaaagacaagctggtctcttccgaagtccgtggccctgtc
gaggaaatcatcacgaaaaccctgaccgacttcctgcaggaaaagccgaacgacgcaaaa
atcatttgctcgaaaatcgtcgaggccgcccgtgcccgtgaagcggcacgcaaggcacgt
gaactgacacgcaggaaaggtgttctggatggacttggcctttccgcaaaactggccgac
tgtcaggaaaaagatccttccatgtgtgaactgtatctcgtcgaaggggattcggcgggc
ggttcggcaaaacagggaagagaccgcaaattccaggcgatcctgcctttgcgcggcaag
gtgttgaacgtcgaaaaatcccgatacgagaaaatgctttcttccgagcagatcacgacc
ctgattgcgacactgggtaccagtatcggcccggatgagttcaatatcgacaagctccgt
tatcatcgcatcattatcatgaccgatgccgatgtggacggagcccacatccgtacattg
ctcttgaccctgttctaccgccagatgccgcagctggtcgaaagaggctacgtatacatt
gcccagcctcctttatacaaaatcaagaacggcaaggacgagcgttatctgaaagacgat
ctggaagaagccaatcacatgatgtcgatagcccttcagggcgcttcattgacgccacgt
gaaggtgcagaaccgattgccggtgaacagttgaaggaaatggctgaccagcacaccatc
gcctataacatcatccagcgtatttcaagaatgatcgacatggatgtattgtccgccatt
atgaacggtgcgaagctgaacctgaattcaatggaagaagccgaacaatcggcccggtcg
ctggcgaaaatcattaacgatccaactgttgaagtcaacgtcgagaataatgaaaacggt
gatattgctctctccgtcatcaaaactcattatggcaatgcccacgtcaccagactcgac
aaggatttcgtatatggcaatgattaccggactctggaaaaaacggccacagcatttttg
aacctgatcggacccggtgccatgatcactcgtggtgaaggtgaccgcatgcgccagctg
gctgtgaaaaacttccatcaggcaatgcaatggctgcgttccgaagctgaaagaggcatt
tccaagcaacgttataaaggtctgggtgaaatgaatccggatcagttgtgggaaacgacg
atggacccgaccatgcgtcgtcttttgaaagtcaaaatcgaagacgccatcaccgcggac
cagattttcacgacgctgatgggcgacaatgtcgagccacgccgggcgtttattgaaaat
catgcacttctggccggcaatatcgacgtctga

  All links  
Gene (12)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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