KEGG   Oryza glaberrima (African rice): 127752489
Entry
127752489         CDS       T08853                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127752489
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ogl03021]
    127752489
Enzymes [BR:ogl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     127752489
Transcription machinery [BR:ogl03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     127752489
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpa2_4 RNA_pol_Rpb2_2 DUF3134
Other DBs
NCBI-GeneID: 127752489
NCBI-ProteinID: XP_052133845
Position
10:complement(18376504..18388415)
AA seq 1174 aa
MAAGKSSSASKEDQYAALRELYRPHIDSFDYFIDEGLDKMLQSIRPVEITVPNSPTTLRI
SLEKGHLFPPKRDGRLDAPLYPQQCRQARTTYHGEFKVDTFIQCNDGPAVRQTFNFGYLP
IMLMSKLCHLRGADSEKLIFHGEEATEMGGYFICGGMERLVRILILQKRNYPMGLIRGSF
VNRGAGYTDKAVIIRCVQDDQSSVTIKLYYLLNGSARLGFWLGGREFLLPVGIVLKALID
TSDREIFTSLTCCYSDHYERGKGVVSTQLIGERAQIILDEVRDLSLFTRTECLLHLGKYF
RSVMEGFEKDDFETVAEAVLKDYIFVHLQNNHDKFNLLIFMLQKLYAIVDQTASPDKADA
LQYQEVLLPGHLITVFLKDRLQDWLRKSKRLIVEEATKNKSFDLNDSQEVRKFLSKTSAY
VGKAIQSMIKVGKVNSQSGLDLPQRDGMTIHAERLNFHRYISHFRSVHRGSSFAKMRTTS
VRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYNSEGATKDFQKIKMSLIARLV
GAGMAQLLPRIERTGPPEVLHVHVDGCIVGSIASAKIEEVVNHLRSLKLLPHSGIPEDLE
VGYVPLSHGGAYPGLYLFTNPARFLRPVRSLLGLSNGGPNIELIGPFEQAFMEIRCPDGG
DGGRNKLFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFR
TDVKAFHLQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDR
GMFRGHIFQTECIDLSAKSRDNVTEFFCKSNLSRDTTAAIESDGLPRIGENIFPNEQYYS
VCNNLTGTVRPIKLKGSEPAAIDYVAVNGTNFKDRLQKANIRLRRVRNPIIGDKFSSRHG
QKGVCSQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLKGKFIDA
TPFASSVKERSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKCEIFLGPVYYQRLRH
MVSDKFQVRTTGRIDQITRQPIGGRKYGGGIRFGEMERDALLAHGASYLLHDRLHSCSDY
HIADVCSICGSLLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQACKTSKGMETVAMPY
VFRYLASELAAMNIKLELRLSNRTEHPTTTSEES
NT seq 3525 nt   +upstreamnt  +downstreamnt
atggcggccgggaagagctcgtcggcctccaaggaggaccagtacgcggcgctgcgggag
ctgtaccggccgcacatcgactcgttcgactacttcatcgacgaggggctcgacaagatg
cttcagtccatccgccccgtggagatcaccgtccccaactcccccaccaccctcagaata
tccttggagaaaggtcatctgttcccaccaaagagggatggtcggttggatgcaccgctc
tacccccagcagtgcaggcaggcacggacgacgtatcatggggaatttaaagtggatact
ttcatccaatgtaatgacggaccagctgtcaggcaaaccttcaattttggttacttgcct
attatgttaatgtcaaagctttgccatctaagaggtgcagattctgaaaaattgattttc
catggtgaagaggcaacagaaatgggcgggtacttcatatgtggtgggatggagagactt
gtacggattcttattttacaaaaacgtaactatcctatgggcctgatccgtggctctttc
gttaatcgtggtgctgggtacactgacaaagcagtgatcataagatgtgtccaagatgat
cagtccagtgtgacaataaagctgtattacctcctaaatggcagtgcaaggcttgggttc
tggttgggaggcagagaatttctccttcctgttgggattgttctcaaggccctaattgat
actagtgaccgggaaatatttacaagcttgacatgctgctacagtgatcattatgaaaga
ggaaagggagttgtcagcactcaacttattggtgaaagggcacaaataattcttgacgaa
gtcagagacctgtctctttttactcgcacagaatgcttgttgcatcttggaaagtacttc
cgatctgtgatggaaggatttgagaaagatgattttgaaactgttgctgaggcagttctt
aaggactatatttttgttcacctgcaaaacaaccatgacaaatttaatttattgatattt
atgctgcagaaactttatgcgattgtagatcaaactgcgtcacctgataaagctgatgct
ctacagtaccaggaagttctcttgcctggccacctgataacagtttttctaaaggataga
cttcaagattggttgagaaagtccaaacggttaattgttgaagaggctacaaaaaataaa
agctttgatctcaatgactcacaggaggtcaggaaatttctcagtaaaacttcagcatat
gttggcaaagctattcagagtatgataaaggtcggaaaagtaaattcacaatcagggcta
gatctgccacagagagatgggatgaccattcatgctgaacggctcaactttcatcgttat
atttcgcatttccggtctgtgcataggggttctagttttgctaaaatgcgtacgacatct
gtgaggaagttgcttccagagtcatggggtttcctctgtcctgttcatacacctgatgga
gagccttgtggtttactgaaccatatgacttccacatgccgtatttcatccttttacaac
tcagaaggggcaactaaagattttcagaaaataaagatgtcacttattgctcgtttggtt
ggcgctggaatggcccaactgttgccgaggatagagcgaactggtcctccagaagtccta
catgtccatgtggatggatgcattgttggttccatcgcttctgctaagattgaagaagta
gtaaatcatcttagaagtttaaaattgcttccacattcagggattccagaggatttggaa
gtgggttatgtacccttaagccatggtggggcttatcctggactataccttttcaccaat
ccagctagatttcttcgtccggtcagaagtctcttaggtctatccaatggagggccaaat
attgagctgattggaccatttgaacaggcattcatggaaatacgatgccctgatggtggg
gatggtggaagaaacaaattatttcctgcaactcatgaagaaatccaccctacagccatt
cttagtgtagttgcaaatttgacaccttggtctgatcacaatcaaagtcctcggaacatg
taccaatgtcagatggcaaagcaaaccatgggattctgtggccaagctctaaaattccgt
actgatgtaaaagcatttcatctacagacccctcagacaccaattgtccggacagctaca
tatagcaagtattgcatggatgagttcccatccggaacaaatgctattgttgcggtgcta
tcatacacagggtatgatatggaggatgccatgattttgaataaatccgctgttgatcgt
gggatgttccgtgggcacattttccagactgagtgcattgatttatcagcaaaaagtaga
gataatgttacggagttcttttgcaagagtaatctttcgagggacactaccgctgcaatc
gaatcagatggccttcctcggattggagagaatatatttccaaatgagcagtactacagc
gtctgtaacaatctcactggtacagtaaggcctatcaaactgaagggctcagaacctgca
gctattgattatgttgctgtcaatgggacaaattttaaggatcgtctacaaaaggctaat
attcgtctgcgtcgcgtgagaaatcctataattggtgacaagttcagcagcagacatggt
caaaagggagtttgttcgcagttgtggcctgatattgatatgccattctctgctaatact
gggatgaggccagatctcatcattaatccccatgcatttccttcacgaatgactatagca
atgctcttagagtcgatagcagcaaaggccggaagtctgaaagggaagttcattgatgca
acgccttttgcaagctcagttaaagagagatcaaattccattgtggatgaactgggaccc
atgcttgcttcttatggatttaattaccatggaacagaaattctatatagtggagttttt
ggcactgagatgaaatgtgagattttccttggacctgtatactatcaacgccttcgtcat
atggtctcagacaaatttcaggttcgtaccacagggcgaatagatcagatcacaagacag
ccaataggaggaaggaaatacggtggagggattcggttcggtgagatggagcgagacgcg
cttctcgctcatggtgcctcttacctcctacatgacaggctccattcctgctccgactac
catatcgcggacgtgtgctccatctgcgggagcttgctgacggcgacggtgatcaaatcc
gaaagccagaagaaagccaagcgcgacatgctcgggctccccaccgtaaaacctcccaag
aactttgcctgccaggcctgcaaaacaagcaaagggatggagaccgtcgccatgccttac
gtcttcagatacctggcctccgagttggcggccatgaacataaagctggagcttcggctc
agcaatagaacagagcatcctactactaccagcgaagaatcctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (11)   

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