KEGG   Oryza glaberrima (African rice): 127754316
Entry
127754316         CDS       T08853                                 
Name
(RefSeq) uncharacterized protein LOC127754316
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
ogl  Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ogl03041]
    127754316
Spliceosome [BR:ogl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    127754316
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    127754316
SSDB
Motif
Pfam: MA3
Other DBs
NCBI-GeneID: 127754316
NCBI-ProteinID: XP_052135755
Position
11:complement(2265839..2270745)
AA seq 671 aa
MSQVRSAPELDSRRRRRDSDDESGERDLDTRRHRRRSPSSESCSSSGDDDRSRRPRHDES
SRRRQRDQSHRRDRGGHDERRRRSPQRRKEPTPPPPLLPEMVPGRTGGIYIPPFRMAQMM
REVEDKSSAEYQRLSWDALKKSINGLVNKVNATNVKNIVPELFAENLVRGRGLFCQSCIK
SQMASPGFTDVFAALVAVVNTKFPEIGRLLLVRVVLQLKRAYKRNDKPQLLAATKFIAHL
VNQVVAHELVALELLTVLLENPTDDNVEVAVGFVKECGAMLQDLSPQGLHAIFERFRGIL
HEGEIDKRVQFLIEGLFAIRKAKFQGFPAIHPELDLVEQEDQFTHEISLEDELDPETNLN
VFRGNPNFAEDEKAYENLKRSILGAESSDDEEGSDDSSDEDAEEESDDEEDEEQMEIRDQ
TETNLINLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYY
GLLGQRFCMINKVYQDNFEKCFVQQYSMIHRLETNKLRNDAKFFAHLLGTDALPWHVLAY
IRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLNDPNMQDSFDLIFPKDHPKNTRFS
INFFTSIGLGGITETLREYLKNMPRLIMQKQKPASSESDSSDSGSGSDSYSSESESSSDE
SDRKRNKRRKK
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgtcgcaagtcagatccgcccctgagctggacagccgtcgccggaggcgggactctgac
gacgagagcggcgagcgcgacctcgacacccggcgccaccgccgccggagccccagctca
gagtcgtgttcgtcctccggcgatgatgaccgtagccgtcggccccgccatgacgagagc
tccaggaggcggcagagagaccagagccaccgccgggacaggggtggtcatgatgagcgg
cgccggaggagccctcagaggaggaaggagccgactccgccgccgccgcttctaccggag
atggtaccagggcgcacaggagggatctacatcccgcctttccgcatggcgcagatgatg
agggaggtggaggacaagtcgagcgccgagtaccagcgcctcagctgggacgcgctcaag
aagagcatcaatggcctggtgaacaaggtgaatgctaccaacgtaaagaatattgtgccg
gagctgttcgccgagaacctggttcgtgggcgggggcttttctgccaatcgtgcatcaag
tcgcagatggcttcacctggcttcaccgacgtgtttgctgcgctcgtcgccgttgtgaat
accaagttccctgagattggtcgcctgcttcttgttcgcgtcgtgcttcagctcaagaga
gcatataagcgaaacgacaagccacaactgcttgcagcaaccaagttcatagcacacttg
gttaaccaggtcgttgctcatgagctcgtggcactggagcttcttactgtactgcttgag
aacccaactgatgataatgttgaggtagcggtgggttttgttaaagaatgtggggcaatg
cttcaggacttgtctccacaagggcttcatgctatttttgaaagatttcgaggcattctt
catgaaggtgaaatagacaagcgtgtgcagtttctgatcgaaggcctttttgcaattcga
aaggctaaatttcagggattccctgctatacatccagagttggatcttgtggagcaggaa
gatcaatttactcatgagatatcccttgaggatgagctagaccctgagactaatctaaat
gttttcaggggaaatccaaattttgctgaagatgagaaggcatatgagaacctaaaaaga
agcatccttggagcagaatcttctgatgatgaagaagggtctgatgattcttctgatgag
gatgctgaagaagaatccgatgatgaagaggacgaagagcagatggagattagggatcaa
actgagaccaatctcattaaccttcgaagaaccatttacttgacaatcatgtcaagtgtt
gattttgaagaagctggtcacaagcttctaaaaattaaacttgagcctggtcaagagatg
gaattgtgcatcatgctgcttgagtgctgcagccaagagagaacatacctgcgatattat
ggattgctagggcagcgattttgcatgattaacaaagtttaccaagataactttgagaaa
tgtttcgtgcaacaatattccatgatacatcgtctggaaacaaacaaactgagaaatgat
gctaaattttttgcgcatttgttgggcaccgacgcgcttccttggcatgttttagcttac
atccgtttgacagaggaggacaccacgtcatcttctagaattttcataaaaatactcttc
caggaattatcagagcatcttggtattcgtctactcaatgaaagactaaatgatcctaac
atgcaagattctttcgatttgatcttcccaaaggatcatccgaagaataccaggttttcc
ataaatttcttcacttccattggactgggtggtatcacagagactctgagagagtatttg
aagaacatgccacggctaataatgcaaaaacagaagcctgcctcgtctgaatcagactca
agtgattcagggtctggttcagacagctacagctcagaatcggaatcaagttctgatgag
agtgacaggaagcgaaacaagaggcggaagaagtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (7)   

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