KEGG   Oryza glaberrima (African rice): 127755556
Entry
127755556         CDS       T08853                                 
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.12
  KO
K14487  auxin responsive GH3 gene family
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04075 Plant hormone signal transduction
    127755556
SSDB
Motif
Pfam: GH3 GH3_C GH3_M
Other DBs
NCBI-GeneID: 127755556
NCBI-ProteinID: XP_052137191
UniProt: I1R2I8
Position
11:4289903..4292000
AA seq 614 aa
MLEEEDKLMSREDEEEEIMAWFERTTRDAADVQRETLRRILAENAGVEYLRELGLAGLTD
AGSFRARVPVVTHADLDPYIQRVADGDASPVLTAKPVTAISLSSGTTQGKRKRLLFNDDL
LRSSIQFFHASCAFTNRAFPVEDGRVLQFMYGSRQETTKGGLTATTVMTNLLRSEEFTAS
MAARSRPRLPSCSPSEVVFSPDFDESLYCHLLCGLLLAGEVRAVSASFAHSIVVALQALE
RVWRELCADIRRGAASPARVTTPAVRRAVAPILAAPNPALADALERRCAALGDWSGVIPA
LWPNARYVQATMTGSMEHYVKKLRHYAGGVPLVSGNYASSEGVIGINAEQHAPPESVVFT
VLPDAAYFEFIPLKPPCTDAADDDDNPAAAGSSCYVDADDANPVGLTDVVVGEHYEVVMT
TFTGLYRYRLGDVVKVAGFHHATPKLRFVCRRSLILSINVDKNSEHDLQLAVDSAAKILA
GDGENHKQLEIADYTSHADTSSDPGHYVVFWELNGGGEEDGGGVLQRCCDEMDRAFGADA
GYAQSRKTCAIGALELRVLRRGAFQEVLRHYVAGGSSAGQFKMPRCVAPSNAGVLRVLKD
NTINIFFSTAYDYD
NT seq 1845 nt   +upstreamnt  +downstreamnt
atgttggaggaggaggacaagctcatgagccgcgaggatgaggaggaggagatcatggcc
tggttcgagcggacgacgcgcgacgcggccgacgtgcagcgggagacgctgcggcgcatc
ctcgccgagaacgccggcgtcgagtacctccgggagctcggcctcgccgggctcaccgac
gccggcagcttccgcgcccgcgtccccgtcgtcacccacgccgacctcgacccctacatc
cagcgcgtcgccgacggcgacgcctcccccgtcctcaccgccaagcccgtcaccgccatc
tccctaagctccggcacgacgcaggggaagcgcaagcgtctcctgttcaacgacgatctc
cttcgttcgtcgatacagttcttccatgccagctgcgcgttcacgaacagggcgttcccg
gtggaggacggcagggtgttgcagttcatgtacggcagccggcaggagacgaccaagggc
gggctcacggcaacgacggtgatgaccaacctgctccgcagcgaggagttcacggcgtcc
atggcggccaggtcgcggccgcggctgccgagctgcagcccaagcgaggtggtcttctca
ccggacttcgacgagtcgctctactgccacctgctctgcggcctcctcctcgccggcgag
gtcagggccgtgtccgcctcgttcgcgcacagcatcgtcgtcgcgctccaggcgctcgag
cgggtgtggcgggagctgtgcgcggacatccgccgcggcgccgcgtcgccggcgcgggtc
accacgccggccgtccggcgagccgtggcgcccatcctcgccgccccgaaccccgcgctc
gccgacgcgctggagcgccggtgcgccgccctgggcgactggtccggggtgatcccggcg
ctgtggccgaacgccaggtacgtgcaggccaccatgacggggtccatggagcactacgtc
aagaagctgcggcactacgccggcggcgtgccgctggtctccggcaactacgcctcgtca
gagggggtcatcggcatcaacgcggagcagcacgcgccgcccgagtccgtcgtgttcacc
gtgctgcccgacgccgcctacttcgagttcatccccctcaagccgccctgcaccgacgcc
gccgacgacgacgacaacccggccgccgccggctcgtcgtgctacgtcgacgccgacgac
gccaaccccgtcggcctgacggacgtcgtcgtcggcgagcactacgaggtcgtcatgacc
acgttcaccggcctgtaccgctaccggctgggcgacgtggtgaaggtggccggattccac
cacgcgacgcccaagctcaggttcgtgtgccggcgaagcctcatcctgtccatcaacgtc
gacaagaacagcgagcacgacctccagctcgccgtcgacagcgccgccaagatcctcgcc
ggcgacggcgagaaccacaagcagctcgagatcgccgactacaccagccacgccgacacg
tcgtcggacccgggccactacgtcgtcttctgggagctgaacggtggcggtgaggaggac
ggcggcggcgtgctgcagcggtgctgcgacgagatggaccgggcgttcggcgccgacgcg
gggtacgcccagtcgaggaagacgtgcgccatcggggcgctcgagctgcgggtgctgcgg
cgcggggcgttccaggaggtgctccgccactacgtcgccggcggcagctcggcggggcag
ttcaagatgccccggtgcgtcgcgccgtccaacgccggcgtgctccgggtccttaaggac
aacaccatcaacattttcttcagcactgcctacgactacgattga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (8)   

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