KEGG   Oryza glaberrima (African rice): 127757564
Entry
127757564         CDS       T08853                                 
Name
(RefSeq) uncharacterized protein LOC127757564
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
ogl  Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ogl03041]
    127757564
Spliceosome [BR:ogl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    127757564
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    127757564
SSDB
Motif
Pfam: MA3 HEAT_5MP1_2
Other DBs
NCBI-GeneID: 127757564
NCBI-ProteinID: XP_052139063
UniProt: I1R5B3
Position
12:7592715..7597271
AA seq 775 aa
MAASVSPAASPPRRHRHRHDDSPPRRRRRRHDDDSPRHRRDDRKRRASPSPSPSPSPSDR
DADRHRGKSRASPPRRPRDSDPAESNGGGAPKPGGDNGGDRSPRRARVPDADAEEGGRRR
RRRSTDSDDERGDRDRHRRRHRRRSPSSESSDGGRSRRHRRDESSRRQRDERRRDRGGRE
EHRRSPDRKEPTPPLPPPPPLLPEMIPGRTGGIYIPPFRMAQMMREVEDKSSPEYQRLSW
DALKKSINGLVNKVNATNIKNIVPELFAENLVRGRGLFCQSCIKSQMASPGFTDVFAALV
AVVNTKFPEIGRLLLVRVVLQLKRAYKRNDKPQLLAATKFIAHLVNQVVAHELVALELLT
VLLENPTDDSVEVAVGFVKECGAMLQDLSPQGLHAIFERFRGILHEGEIDKRVQFLIEGL
FAIRKAKFQGFPAIRPELDLVEQEDQFTHEISLEDELDPETNLNVFRANPNFAEDEKAYE
NLKRSILGAESSDDEEGSDDASDEDAEEESDDEEDEEQMEIRDQTETNLINLRRTIYLTI
MSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVYQE
NFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFI
KILFQELSEHLGIRLLNEKLNDPNMQDSFDSIFPKDHPKNTRFSINFFTSIGLGGITETL
REYLKNMPRLIMQQQKPASSESGSSDSGSASDSSSSESESSSDESEKKRSKRRKR
NT seq 2328 nt   +upstreamnt  +downstreamnt
atggctgcctccgtctcgcccgccgcctcccctccccgccgccaccgccaccgccacgac
gactcccctccccgccgccgccgccgccgccacgacgacgactcccctcgccaccgccgc
gacgaccgcaagcgccgcgcctccccgtccccgtccccgtccccctccccctccgaccgc
gacgccgaccgccaccgcggcaaatctagggcttccccgccccgccgcccccgcgattcc
gaccccgccgagagcaacggaggaggagcgcccaagcctggcggggacaacggcggcgac
cgttctccccgccgcgctagggtgcccgatgcggacgcggaggagggcggccgccgccgg
aggaggcggtccaccgactccgacgacgagagaggcgaccgcgaccggcaccggaggcgc
caccgccgccggagccccagctcggagtcctccgatggtggccgtagccgtcgccaccgc
cgtgacgagagctccaggcggcagagagacgagaggcgccgggacaggggcggtcgcgag
gagcaccggaggagccctgataggaaggagccgactccgccgctgcccccgccaccgccg
ctcttgccggagatgatacccgggcgcacaggagggatctacatcccgcctttccgcatg
gcgcagatgatgagggaggtagaggacaagtcgagccccgagtaccagcgtctaagctgg
gatgctctcaagaagagtatcaatggtctagtgaacaaggtgaatgccaccaacattaag
aatatcgtgccggagctgttcgccgagaacctggttcgtggaagggggctcttctgccaa
tcgtgcatcaagtcgcagatggcttcgcctggcttcacagatgtgtttgctgcacttgtt
gcggttgtaaataccaagttccctgagattggccgcctgcttcttgttcgtgttgtgctt
cagctcaagagggcatataagcgaaatgacaagccacaattgcttgcagcaaccaaattc
atagcacacttggttaaccaggttgttgctcatgagctcgtggcgctggagcttcttacc
gtgctgcttgagaacccaactgatgatagtgttgaggtcgcagtggggtttgttaaagaa
tgtggggcaatgctgcaggacttgtctccacaaggtcttcatgctattttcgaaagattt
cgaggtattcttcatgaaggtgaaatagacaagcgtgtgcaatttttaattgaaggactg
tttgcaattagaaaggctaaatttcagggattccctgctatccgtccagagttggatctt
gtggagcaggaagaccaatttactcatgagatatcccttgaagatgagctagacccagag
actaatctaaatgttttcagggcaaatcctaattttgctgaagatgagaaggcgtatgag
aacctaaaaagaagcatcctgggagcagaatcttctgatgatgaagaagggtctgatgat
gcttctgatgaggacgctgaagaagaatctgacgatgaagaggatgaagagcagatggag
attagggatcaaactgagactaatctcattaaccttcgaagaaccatatatttgacaatt
atgtcgagcgttgattttgaagaagctggtcacaaacttctaaaaattaaactcgagcct
ggccaagagatggaattgtgcatcatgcttcttgagtgttgcagtcaggagagaacttat
cttcgatattatggattattgggccaacgattttgcatgattaacaaagtttaccaggag
aactttgagaagtgttttgtgcagcagtattccatgatacaccgtcttgaaacaaataag
ctaaggaatgttgctaaattttttgcacatttgttgggtactgatgcgcttccttggcac
gttttggcctacatcagattgacagaggaggacacaacgtcttcatctcgaattttcata
aaaatactcttccaggagttgtctgaacatcttggtattcgtctactcaacgagaaactg
aatgatcccaacatgcaagattcatttgattcaatattcccaaaggatcatccaaagaat
acaaggttctccataaattttttcacctccattggtcttgggggtatcacagagaccctg
agagagtacttgaagaatatgcctcgactgataatgcaacaacagaaacctgcctcttct
gagtcaggatcaagtgattcaggatctgcttcagacagctccagctcagagtcggaatcg
agctctgatgagagtgaaaagaagagaagcaagaggcggaagaggtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (7)   

Download RDF
DBGET integrated database retrieval system