KEGG   Oryza glaberrima (African rice): 127759931
Entry
127759931         CDS       T08853                                 
Name
(RefSeq) serine/threonine-protein kinase ATM isoform X1
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    127759931
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:ogl01001]
    127759931
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ogl03032]
    127759931
   03036 Chromosome and associated proteins [BR:ogl03036]
    127759931
   03400 DNA repair and recombination proteins [BR:ogl03400]
    127759931
Enzymes [BR:ogl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     127759931
Protein kinases [BR:ogl01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   127759931
DNA replication proteins [BR:ogl03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    127759931
Chromosome and associated proteins [BR:ogl03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    127759931
DNA repair and recombination proteins [BR:ogl03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    127759931
SSDB
Motif
Pfam: PI3_PI4_kinase FATC TAN HEAT HEAT_ATR
Other DBs
NCBI-GeneID: 127759931
NCBI-ProteinID: XP_052140102
Position
1:288846..324558
AA seq 2995 aa
MATSRDANEIIEKLSSDRARTRDEGVKLLGTWLQGDRAFSFCRLLARNTANLKPAHLPAS
ATWPFLIMALTKCVIADISGKKRSPKSAAARMLRLAVQCAQDFRLSGRSLLLISVAKKLF
SHIWEVVKDAPSFLIEYSIILRQLLTVKEYRYQMKPRTYSSFVVLYMKKVATGFDEKISN
QASSKEESFRCTLTLHVLLENPPGDYPDIMREEVLCGFCAICSNIREEGKLTRKLIECVN
TFLLKDGPNLGCKSVDIHNAVQDFMFHSWPVTHDRALKSLFITYAKVQLELARAIPEILE
KLLDVIIKELDQNFNTGAGLVWCEAPRDEKAGSLRCFQEELMDLSATALYLAYKCTPRTS
HNKKKLKTEHVMTVIMDSLLRGSLVWSGSICCLIHKYGYRVDKSLLINWFKATCKGLKSV
LSNANALRFQDSLLWLIRVLKEFSALLMSSARDAPPFWLTNDEMSILEGYWQDTWNSLIH
ALPLFSTTALVVDSVLRLLGEMIMRDQVHASFVSEDTWDLQIFKQLPSSSTLYFIACYFS
KIGFQGDVSNSIFIRKNLLRSTFELVHSKGFSLLNEQSVLMIPETIFSLCAGFSSPVINS
ADASQLFGECKNLSKDKCWSHEEELGYSVETLSEINLESPTKAMSEKCSRAHLPRHIQQP
LLLELLEFTKGFMSSNKQFEKVDLPNLVYACSLVCNLIHCSLLSRVFEEKSSFLQVMLDY
VTNAIKHIVSVVMKEHAELSHGLTNLGSVFDTTGSALSSFKSFMHSPLFSLWRVNNKTSS
VLGVTELLDELLEAISELFAQFSSLMNSFDGDNPSKMLPVPFVSLSEDLHPDNRSSFVDM
DLDMTGSGEVDPVTAGGSGSMGISPRPLECKLELVCIISTFFSVVPLHTWEVLYNLADKE
VNIKVGQAILLELCTNISASSSSLSSVLNLVVDMWERSACTLLSSADCLAHVHALLRNLT
ANCDVGHNTDGRSQGCKVASNENQDVFLDLLNKATEISFTDWFFRIRLINCISNFIYLFP
DVAQDMIGHLLSMLHDTDYRVRLYLARKIVVLFQIWEGHSELFHDVCSSIGVKMVQFSNE
NPVRAREVLAIGPQPVPIIETALITLAHLSLQSEDIEVECVFMISAVAAIEPSQRELAYA
LFDSVSKRLNYASRSKYLDQLIGPILFRWVACDVSLVSLVEVKEMFGFKSDEPKNFIEHC
CSWLLSFLILRGETADLNWLSKILSQPLSAVIKGYFVPIFGLCIAARCGSGPEKDLAETV
LCESLLQLGEISEPERDDLIKKHMVSIVGFLLSVSSSSRQPEIPHFSKEAVAHSVKTVVD
GFMDAMDGNLAETVVIDKINIFRSDRVFKFLLAIHQQIADASHPRHIRHRLCAIEVLIDV
LGHRVALYSTWFYIICIVGSYIRRQPLQDQCCNILSKLLAAFNSNCSTETDAALGKQLQL
LVPKLVTCCLRNEKGGKGAIADSSRVLSLLRQLTVDADPLLYDYIRDLEPLPSFDCLKDI
QVFHASLSGSYDSRDQFLKFVSRAPHLPPELFLLSLRMHHKKLLLGEIIYRGDVSVDNAD
TISCWHSDPDVVSAVWTLVDLCSSSSVANEASSVLADFISRAGISDVHQVIFHVPNLTEK
YPIQPHISKEDKLPSDYGISDDILVGLLKLLKACLSDESAEIIDVTSRTLRGVLSTARGL
NALHCLDSLDRSLLMVHSRGINAQVVEQTLLGMEKVSGVSLEDSDLWRTDGRTYKQWLCT
LVGSLICHCDDIILRLCRSIAFLKVEAAELLLASALVNIAGNLDSNAGICRLISSMVEEK
IFCDSNHLMKSVHLFLDALNVVRSYYVAEKARGCPSNTLKDGRSVRSKSRSPTTTPSSSW
KKVYWLSVDYLVAARAANRCSCDFATLMYVELWCEEKFNMLALGPPDFSHEESLPPHIDL
LVASFTRINELDSIYGITLANEITSQIIRYEHEGDWSSALEYHDLLVRSTRKENHGSLAG
TALTVPSDVPSKAEEKMLNWQMHKGLMRSLQKTGCSHVLDVYCQGLSNQKSCLQQDSEFI
DIQYEAAWRAGNWDFSFFIPYSSQPSTHSQSYCLFNGNLHSCLRALQNGDSEEFHVKLSN
SKMDLVLALSNASKESTKYIHSTVIKLQMLDHLTMAWDLRWKFCLNQTSKSYVGNKDFSP
VPTVPTRMQLELLNKEWTFILCQTERNLDLLEPFLAFRSAVLKILGSEEHLREHLFQSAS
ALRKGARFSLAAAALYELKELRYHMDHQAMPNSYFLFKLEEAKLLRAQGQHDMAINLGKY
ILKNHPDKKNVSDVYRLVGKWLAETRSSNSRTIIDDYLRHSVDFTELHKSPDKKYKSRQC
RTYFHLAHYTDGLFKSYEERLSSNEWQAALRLRKYKSKELDTLMKRLKSSSKSEKTDYSV
KIQELQKQLALDEEEAGKIQDDRDKFLNLALQGYQRSLVVGGKYDLQVVFRLVSLWFSLF
SREQVVKAMMKTTKEVQSYKFIPLVYQIASRLGSSKDAQGSTNFQNALASLLKKMAIDHP
YHTIFQLLALANGDRVKDKQRSRSSFIVDMDKKLAAENLLKDLSSSHGALIRQMKQMVEI
YIKLAELETKKEDTNKRIPLPREIRSICQLELVPVVTASIPVDPNCQYEEGSFPHFNGLA
DSIMVMNGINAPKVIECIGSDGNKYRQLAKSGNDDLRQDAVMEQFFSLVNMFLQNHRDTS
ERRLRIRTYKVVPFTPSAGVVEWVNGTVPLAEYLVGSTRSGGAHGRYGTGDWTYHQCRET
MTNEKDKRRAFVKVCNNFRPVMHHFFLERFLQPADWFQSRLAYTRSVAASSMVGYIVGLG
DRHSQNILIDQETAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDMIDGMGVTGVEGVFRR
CCEKTLSVMRANKEALVTIIEVFVHDPLYKWALSPLKALQRQKESEDIDSCLDDSQEACE
GNKDAARAILRVKQKLDGYEDGEMRSVQGQVQQLIQDAADADRLCQMFPGWGAWL
NT seq 8988 nt   +upstreamnt  +downstreamnt
atggcgacctcccgcgacgccaatgagatcatcgagaagctctcctccgaccgggccaga
acccgcgatgagggggtgaagctgctgggcacctggctgcaaggcgaccgcgccttctcc
ttctgccgcctcctcgcccgcaacaccgccaacctcaagcccgcccatctccccgcctcc
gccacatggcccttcctcatcatggcgctcaccaaatgcgtcatcgccgacatctccggc
aagaagcgctctcccaagagcgccgctgccaggatgctccgcctcgccgtccagtgcgct
caagacttccgcctctcagggcggtcgttacttttgatttccgtcgctaagaaacttttc
agtcatatatgggaggttgtaaaagatgctcccagctttctgatagagtacagcataatt
cttaggcagcttttaactgttaaggagtaccggtatcagatgaaacctcgaacatatagc
agttttgttgtgctctacatgaagaaagttgcgactggttttgatgaaaaaatcagtaat
caggccagctccaaggaggaatccttccgttgtacactgacccttcacgttctacttgaa
aacccaccgggtgattaccctgatatcatgagggaggaggtcctttgtgggttttgtgca
atatgctcaaatattagggaagagggaaagctgacccgcaaacttatagaatgcgttaac
acctttctactgaaggatgggccaaacctgggatgcaaatctgttgatatccataatgct
gttcaagattttatgttccattcttggcctgtgacccacgacagggctttgaagagcttg
ttcatcacctatgcaaaggttcagctggaacttgctagggctattcctgagattttggaa
aaacttcttgatgtcatcattaaggaattagaccaaaattttaatactggagccggttta
gtatggtgcgaggcacctcgagacgagaaagctggctccttgaggtgcttccaggaagaa
ttgatggatctatctgctactgccttatatctggcctacaaatgcacaccgaggacatca
cataacaagaaaaagttaaagacggagcatgttatgaccgtcatcatggatagcctgctg
agaggatcccttgtttggagtggttctatttgttgtcttattcacaagtatgggtaccga
gtggataaatctttgttgatcaattggttcaaggcgacctgtaagggtttgaaaagtgtt
ttgagcaatgcaaatgccctacggtttcaagattcactgctttggcttatcagggttctc
aaggagttctctgcgcttctcatgtctagtgctagggatgcaccaccattttggttaaca
aatgacgagatgtcaattttggaaggttattggcaagatacctggaattctcttattcac
gcacttcctttgtttagcaccacagctctagtcgttgattcagttctgaggttgttgggt
gaaatgatcatgcgggaccaagttcatgcatcatttgtgtcagaagatacatgggaccta
caaatatttaaacaattaccatcatcgtctactctgtacttcattgcttgttacttttca
aagataggttttcagggcgatgtatccaattccatatttattagaaagaatctgttaaga
tcaacttttgagttagtgcactccaagggtttctctcttttgaatgaacaaagtgttctg
atgattcctgaaaccattttttctctctgtgctggtttttcctcgccagtgattaactca
gcagatgcatcgcaactgtttggtgaatgtaaaaacttatctaaggacaagtgctggtct
catgaggaagaactaggttattctgtggaaactctatcggagatcaatctggaaagtcct
accaaggccatgtctgagaaatgcagccgagcgcaccttcctcggcatattcagcaaccc
ttgctcctggagcttctagagttcaccaaaggattcatgtcctcaaataaacagtttgag
aaagtggacttacctaatcttgtttatgcctgctctctagtctgcaatctaattcattgt
tcgctgttgtcaagggtctttgaagaaaaatcttcttttctgcaagttatgttggattat
gtcaccaatgccataaaacatattgtgtcagtggttatgaaggaacatgctgaactttct
catggtcttaccaatctaggatcagtatttgacacaactggctcagccttatcctcattt
aagagcttcatgcattctccattatttagtctgtggagagttaataacaaaactagttct
gtgcttggtgtcaccgaattacttgatgaactcttagaggcaatttctgagctatttgct
cagttctctagtttgatgaacagttttgatggagacaatcctagtaaaatgttgccagtg
ccttttgtcagtttgtcagaggacctacatcctgacaacagaagtagttttgttgatatg
gatcttgatatgactggctctggtgaagtagatcctgtcacagcaggtggaagtggaagt
atgggtatctcaccacggcctttggagtgcaagctagaactagtctgtattatttcaact
tttttctctgttgtgccgcttcatacctgggaagtcttgtacaacttagctgacaaagag
gtcaatatcaaggttggccaggctatcttgcttgaactttgcacaaatatctctgcctca
tcaagtagtttatcttctgtgctcaatcttgtagttgatatgtgggaaagaagtgcttgt
acactacttagctctgcagattgtttagcacatgtccatgccttgctaaggaatttgaca
gctaattgtgatgttgggcataatactgatggaaggtcacaaggatgtaaagtggcatcc
aatgagaaccaggatgtcttcttagacttactaaacaaggctacagagatcagtttcaca
gattggtttttccgcatcaggctgattaattgcatctccaactttatttatctgttccct
gatgtcgcacaggacatgattggtcatttgcttagcatgctgcatgatactgattaccgt
gttaggttgtatttggctcggaaaattgttgtgctattccaaatatgggaaggacacagc
gagttgttccatgatgtttgctccagtattggtgtcaagatggtgcagttttcaaatgaa
aatccagttagagctagagaagtgttggctattggtccacagcctgttcctattattgaa
actgctctgattacactagctcatttgtccttacaaagtgaggatattgaggttgagtgt
gtattcatgatttccgctgttgctgctatagagccttctcagcgagaattagcttatgct
ctatttgattctgtctcaaagaggctcaattatgcttcacgaagtaagtatttggaccaa
ctgataggtccaattcttttccggtgggttgcttgtgacgtgagcctagtttcgcttgtt
gaggtgaaagaaatgtttggctttaaatcggatgagccaaagaacttcattgaacattgc
tgctcatggttactttctttccttattctgaggggtgagactgccgatcttaattggcta
tccaagattttgtctcaacctttgtctgctgttataaagggatactttgtcccgatcttt
ggattgtgcattgctgccagatgtggctcagggccagaaaaggacttagcagagactgtc
ttatgtgaatcccttttgcagcttggtgaaatttctgagcctgagcgcgatgatctcatt
aaaaaacatatggtttccatagttggctttttgctatcagtttcatcttcttcacgtcag
ccagaaatcccacacttctccaaggaggctgtggcacactcggtgaaaacagttgttgat
ggatttatggatgcaatggatggtaatttggctgaaacagttgttattgataaaatcaat
atattccgttcagacagggtttttaagtttctgttggcaatacatcagcaaattgcagat
gctagccatcctaggcatattcgtcatcggctttgtgccattgaggttttgatagatgta
cttgggcatagagtggctctttacagcacttggttctatattatttgtatagtggggagt
tacatccggagacaaccattgcaagaccaatgctgcaatatcttgtccaagttgttggct
gctttcaattcgaactgttctactgaaactgatgctgcgcttggcaagcagcttcagctc
ttagttccaaaattggtcacttgttgccttcgcaatgagaagggagggaaaggtgctatt
gcagactcatcaagagttttatctttgcttcgtcaattgacagttgatgctgatccattg
ctttatgattacataagagatttggagccacttcctagctttgattgcttaaaagatata
caagtgttccatgcttcactttctggttcctatgattcaagagatcagtttctaaagttt
gttagcagggctcctcacttgccaccagagctgtttctgctgagtcttcgtatgcatcac
aagaagttattattgggagagatcatatatagaggcgatgtatctgtggataatgcagac
acaattagctgttggcacagtgacccggatgttgtttctgctgtatggactcttgttgac
ctctgtagctcatcgtctgtggcaaatgaagcttcatcggtgcttgctgattttatttct
agggctggcatatctgatgtgcatcaagtgatatttcatgtgccgaatcttactgaaaag
tatcccatacaaccacatatttccaaggaggataaattgccctcggactatggcatttct
gatgatattttggttggtcttctgaaacttttgaaagcttgtttgtctgatgagtcagct
gaaataatagatgttacttcacggacactgaggggagttctgtcaacggcaaggggtctg
aatgctctgcattgccttgattctcttgataggtctttgctgatggttcattcacgaggc
ataaatgctcaggtagttgaacaaacacttttgggcatggaaaaggtttctggtgtttca
cttgaagattcagatttatggagaactgatggtcggacttacaagcaatggctatgcacc
ttggtgggctcactaatttgtcattgtgatgacatcatcttgagactttgtaggagtatt
gcttttctcaaagttgaggctgctgaacttttgcttgcaagtgctcttgtgaacattgcg
ggcaatttggattcaaatgctggcatctgcagattaatttcatctatggtggaggaaaaa
atattttgtgactccaatcatttgatgaagtcagttcatctgtttttggatgcgctgaat
gttgtcaggtcttattatgttgcagaaaaagccagaggttgcccttcaaatactctcaag
gatggtagatctgttagatccaaaagtcgatcaccaaccaccaccccatcatcctcctgg
aagaaggtgtactggctttcagttgattatcttgtggctgccagagctgctaataggtgc
tcatgtgactttgcaacactaatgtatgttgagctttggtgtgaggaaaaattcaatatg
ctagcattaggacctccagatttttcgcacgaagagtcgttgcccccacatattgatcta
ctggttgcttcatttactcgcataaatgagctggacagcatttatgggatcacactggcg
aatgagataacttcacaaatcattagatatgagcatgagggtgattggagtagtgctctt
gaatatcacgatttacttgtaagatcaactcgaaaggagaaccatggcagtttggctggg
acagcattgactgtaccatctgatgtgccttctaaagctgaagagaagatgctgaactgg
caaatgcacaaaggtctgatgagatctttgcagaagactggatgtagtcatgtccttgat
gtctactgccaaggtttaagcaaccaaaaaagttgtcttcaacaagattcagaatttatt
gatattcaatatgaagctgcttggagagctggaaattgggatttctcctttttcattcca
tactcttctcagccttctacccattcccaaagttactgccttttcaatggaaatttgcac
agttgcttaagagctctgcagaatggtgattccgaggagttccatgtgaagctttctaac
tccaagatggatcttgtgctggctctttcaaatgctagcaaggagagcacaaaatacatc
cattctactgttatcaaactacagatgttagatcatcttactatggcttgggacctacga
tggaaattctgtctcaatcagacatcaaagtcttatgttggaaacaaggatttttctcca
gttccaactgttcctacaaggatgcagttggaactgctgaataaagagtggactttcatc
ctgtgtcaaacagaacgtaaccttgaccttttggaaccttttctagcattccgcagtgcc
gtccttaagatcttaggttctgaagagcatctcagagaacatttatttcaatctgcttca
gcactccggaagggagcaagattttctttggctgcagctgctttatatgaactcaaagaa
cttcgttaccacatggatcatcaagctatgccaaattcttatttcctatttaagcttgaa
gaagctaaactgctgagagctcaagggcagcatgatatggctataaatcttgggaaatac
attctaaagaaccatcctgataagaagaatgtatcagatgtctatcgattagttggcaag
tggttggctgaaacaagatcgagcaattcaagaactatcattgatgactacctaaggcat
tccgtagattttactgaattgcacaagagcccagacaaaaagtacaagtctaggcagtgc
cgaacatatttccatctagcgcattacacagatggcttattcaaaagctatgaggaaaga
ctttcatccaatgaatggcaagcagctctgcgattaagaaaatacaagtctaaggagctg
gatacactgatgaaaagacttaaaagttcatcaaagagtgaaaagactgattactcagtg
aaaatccaagagttacagaaacaacttgcacttgacgaagaagaggcagggaagattcag
gatgatcgggacaaattcttgaatctagcgcttcaggggtaccaacgctcactcgttgtc
ggtgggaaatatgatctacaagtggttttccggttggtctcactatggtttagtcttttc
tcaagagagcaagttgtgaaagcaatgatgaaaacaacaaaagaggtccagtcctacaaa
ttcataccattggtctatcaaattgcttctagacttggtagctcaaaagatgcgcagggc
tcaacaaacttccagaatgcgctagcttctcttctgaagaaaatggccattgatcatccc
tatcatacaatatttcagcttttggctctagcaaatggtgaccgcgtcaaagacaagcaa
aggagtagaagttcttttattgtagacatggacaagaaacttgctgctgaaaatctgtta
aaggatttatcttcttctcatggagctttgattcgtcagatgaagcaaatggttgagatc
tacattaagttggctgaactagagaccaagaaggaggacacgaacaaaagaattccacta
cctagggagatccgcagcatttgtcagcttgaacttgttcctgttgtaactgctagtatt
ccagtcgatcctaattgtcagtatgaagaaggttcctttccacattttaatgggctagca
gattctattatggtaatgaatggaattaatgctccgaaggttattgaatgtattggctct
gatggtaacaaatatcgccaactcgcaaaatctggaaatgatgacctgcgacaagatgct
gtgatggagcaatttttcagtctagtaaatatgttcttgcaaaatcacagagatacatct
gagaggagattgagaattcgcacatataaggttgttcccttcaccccaagtgctggtgtt
gttgaatgggtaaacgggactgttcctcttgctgaatatcttgtgggaagtacaagaagt
ggtggagcacatggaagatatggaactggagactggacatatcatcaatgcagggagacc
atgacaaatgaaaaagacaagaggagggcgtttgtcaaagtctgcaacaacttcaggcct
gtgatgcaccacttcttccttgagagattcttgcagcctgcagattggttccaaagtaga
cttgcttacacaagaagtgtggcagcaagctcaatggtaggatatattgtgggacttgga
gatcgtcattcccagaatattctcattgatcaagagacagctgaggttgtacacatagat
cttggtgttgcatttgaacagggtctcatgcttaaaactcctgaacgggttccatttcgc
ctgacgagggacatgatagatggcatgggagttactggcgttgaaggtgtatttagaagg
tgttgtgagaaaactctttcggtcatgagggcaaataaagaagcgttggtcactattatt
gaagtcttcgtccatgatccgttgtataaatgggctctttcaccactgaaggctttacag
cgtcaaaaggaaagtgaagacattgactcgtgcttggatgactcgcaagaggcttgcgag
ggcaacaaggatgcagcccgagctatcctccgtgttaagcagaaactagatggatatgaa
gatggtgaaatgagaagtgtacagggccaggtgcaacaactgatacaggatgcagcagat
gcggaccggttgtgccaaatgtttccagggtggggagcatggttgtaa

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