KEGG   Oryza glaberrima (African rice): 127760774
Entry
127760774         CDS       T08853                                 
Name
(RefSeq) uncharacterized protein LOC127760774
  KO
K03504  DNA polymerase delta subunit 3
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03030  DNA replication
ogl03410  Base excision repair
ogl03420  Nucleotide excision repair
ogl03430  Mismatch repair
ogl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127760774
   03410 Base excision repair
    127760774
   03420 Nucleotide excision repair
    127760774
   03430 Mismatch repair
    127760774
   03440 Homologous recombination
    127760774
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ogl01009]
    127760774
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ogl03032]
    127760774
   03400 DNA repair and recombination proteins [BR:ogl03400]
    127760774
Protein phosphatases and associated proteins [BR:ogl01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     127760774
DNA replication proteins [BR:ogl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    127760774
DNA repair and recombination proteins [BR:ogl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      127760774
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     127760774
SSDB
Motif
Pfam: CDC27
Other DBs
NCBI-GeneID: 127760774
NCBI-ProteinID: XP_052141034
Position
1:complement(5090427..5095734)
AA seq 512 aa
MAAAAADPALLDLIPQIHALFADPLRVISYKWLSRNFSVSSNDSKRLLQEFVNKHGADLK
VIYSVSGWLKKNPTNYCVKLTSGHKLEEARQEFKDSCSVQVYSIQACIPKDTAVLWNPEF
VQAEELFNRPFDEENCLRDNRFCGVLNSFVKRTANGKLVSSLPPKPINSVAAAAPLKTSS
APKEQSAKGQQQGLPGSSSPKKGTSNKAEKDISSVLDKATNAPVVKESSIALQGNKNKAQ
NGKALPSNGGSLATMWGRASAKPKTPATTNPTVLPSVAVTADAQICAKEEANADSSDDEQ
AVHYKRGSSANNRKRRAVFDLSDDDEDDNVVAIASPEPPEQCITNPIDEVAQESNPKQEN
LENKQEVEKDVKCCIGRTESPECKTKSSNTVSHSGITLKEKNNGPPPNDNKQDHAAETAS
NSPKRRKVLKTRIDERGREVTEVVWEGEASAGDKAEKNVSDTGAANRATLSSKPQPVAKT
EKSNASSKTAGNKKPAKAGTKQGNIMSFFKKV
NT seq 1539 nt   +upstreamnt  +downstreamnt
atggcggccgccgccgcggacccggccctgctcgacctgattccccagatccacgccctc
ttcgccgatccgctccgtgtgatttcatacaaatggctcagcaggaacttctcagtatca
tccaatgattcaaagaggttgcttcaggagttcgtcaacaaacatggggctgatcttaaa
gtgatttacagtgtgtctggatggttaaagaagaaccccacaaattattgtgtaaaactc
acttcaggccataaacttgaagaagcaaggcaagaatttaaagattcttgttcagttcaa
gtgtacagtatccaggcttgtattccaaaagatactgctgtactttggaatcctgaattt
gtacaggcagaggagctttttaaccggccatttgatgaagaaaattgtttgagagataat
aggttttgtggtgttttgaattcttttgtcaagcgaactgctaatgggaagcttgtgagt
tcattgccgccaaagcctataaatagtgttgctgcagctgcaccgttgaaaactagtagt
gctccaaaagaacaatctgctaagggtcaacagcaaggtctacctggatcatccagtcca
aagaaaggaacaagtaataaggctgagaaggatatttcctcggtcttggataaagccacc
aatgctcctgttgtcaaagaatcatcaattgctctgcagggaaacaaaaacaaggctcag
aatgggaaggcgctgcccagtaatggtggatcacttgctacgatgtggggacgtgcatca
gctaaacccaagactccagctaccactaatcctacagttttaccaagtgttgctgttaca
gctgatgcacaaatatgtgcaaaggaagaagcaaatgctgatagtagtgatgatgaacaa
gctgtacactacaagcgtggctctagtgcaaataacagaaagagaagagcagtctttgat
ctttcagatgatgatgaagatgacaatgttgtagccattgcatctcctgagccaccggaa
cagtgcattacaaatcctattgatgaggttgctcaagaaagtaaccccaaacaagaaaac
ttggaaaataaacaagaggttgagaaggatgtgaaatgttgcataggaaggacagagtct
cctgagtgtaaaaccaaaagtagcaacactgtcagccattctgggatcaccttaaaagaa
aagaacaatggtccaccacctaatgacaataagcaggatcatgctgctgagactgcttcc
aactcacctaaaagaaggaaagttttgaagacacgaatagatgagcggggaagagaagta
accgaggttgtctgggagggtgaagcttctgcaggtgataaggctgagaagaatgtgagc
gatactggtgctgcaaacagggcaactctctcaagcaagccgcagccagtagcaaagacc
gaaaaaagcaatgcttcgagtaaaacagccggcaacaagaaacctgccaaggctggaacc
aagcaaggcaacattatgtcattcttcaagaaggtataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (5)   

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