KEGG   Oryza glaberrima (African rice): 127763402
Entry
127763402         CDS       T08853                                 
Name
(RefSeq) autophagy-related protein 18b
  KO
K17908  autophagy-related protein 18
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    127763402
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogl04131]
    127763402
   03029 Mitochondrial biogenesis [BR:ogl03029]
    127763402
Membrane trafficking [BR:ogl04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    127763402
Mitochondrial biogenesis [BR:ogl03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    127763402
SSDB
Motif
Pfam: PROPPIN WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz BCAS3_WD40 Beta-prop_WDR90_POC16_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_Vps41 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_TEP1_2nd Ge1_WD40
Other DBs
NCBI-GeneID: 127763402
NCBI-ProteinID: XP_052144049
Position
2:complement(32392472..32395552)
AA seq 374 aa
MASSSSPPPPPQIRCASFNQDNSLFYVGTKDGFRIFDAHTGKLHYQKNIGGIGNMEMYFR
TNILAIVGTGEQPVLSPRCLRLIDTVAGVTKKDLNFKTSVLAVRLSRTRLVVVLQDRTFI
YDVNSTTILEEIETVPNTKGLCAFAPNSEACYLAIPASTSKGSALVYKASEPELICQIDA
HESPLAAMAFSSNGTYLATASGKGTIIRVFLVAQATKSHSFRRGTYPSTIYSLSFGPSDD
LPDVLVATSSSGSLHMFFLDAARNRRNQTSKLLGSMIPGAITRALDPANHHIIHNVIPAG
IKSCVAVHKVENSQNSSKLPALRTVVYIITHDGYFREYSINTTKSNESSWVLQRELNLLD
TGCSTPQREEQHKD
NT seq 1125 nt   +upstreamnt  +downstreamnt
atggcgagcagctcgtcgccgccgccgccgccgcagattcgttgcgcctccttcaatcag
gacaacagcttgttttatgtcgggacgaaggatggattcaggattttcgatgcccataca
gggaagctccactaccagaagaatattggtggaatcggcaatatggaaatgtactttcgg
acaaacattcttgctatagtcggtaccggtgaacagcctgtactatctcctcgctgcctt
cgccttatcgacaccgtagcaggtgtcacaaagaaagatctgaactttaagacttcagtt
ttggctgttcgattaagtagaacgaggcttgttgttgtattgcaggacaggacctttatt
tatgatgtaaacagcactactatattggaagaaattgaaacagttcccaatacaaaaggt
ctttgtgcattcgctcctaattcagaagcatgttatttggccatcccagcaagcacatcc
aaaggatctgctttagtttataaggcatcagaacctgaattaatatgccagatagatgct
cacgagtctcccttagctgcaatggcattttcttctaatggcacgtacctggcaacagct
tctgggaagggtactattattagagtatttctcgttgcacaagcaaccaagtcacacagt
tttcggcggggaacatacccatcaacaatatattcactctcattcggaccatcggatgat
ctgcccgatgttcttgttgccacaagttcatcaggctctttgcacatgtttttcctcgat
gctgccagaaatcgaaggaaccaaacgagcaaattgcttggttcaatgattcctggagca
ataactcgtgctttggatccagcaaaccatcacattattcacaacgtcatccccgcagga
atcaagagctgtgtagccgtacataaggtcgaaaattcacaaaattcttctaaacttcct
gctttaaggactgttgtttatatcataactcatgatggatacttccgcgagtactcgatc
aacaccacaaagtcaaatgaatcttcctgggttttgcaacgggagctcaatctactggat
accggttgtagcactccccagcgggaggaacaacacaaggactga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (21)   

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