KEGG   Oryza glaberrima (African rice): 127767620
Entry
127767620         CDS       T08853                                 
Name
(RefSeq) flap endonuclease 1-B
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03030  DNA replication
ogl03410  Base excision repair
ogl03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127767620
   03410 Base excision repair
    127767620
   03450 Non-homologous end-joining
    127767620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ogl03032]
    127767620
   03400 DNA repair and recombination proteins [BR:ogl03400]
    127767620
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogl04147]
    127767620
DNA replication proteins [BR:ogl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    127767620
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     127767620
DNA repair and recombination proteins [BR:ogl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     127767620
Exosome [BR:ogl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127767620
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc 5_3_exonuc_N XPG_I_2 Mo25
Other DBs
NCBI-GeneID: 127767620
NCBI-ProteinID: XP_052148974
Position
3:34256991..34262392
AA seq 412 aa
MGIKGLTKLLAEHAPGAAVRRRVEDYRGRVVAIDASLSIYQFLIVVGRKGTEVLTNEAGE
VTSHLQGMLNRTVRILEAGIKPVFVFDGEPPDMKKKELAKRSLKRDGSSEDLNRAIEVGD
EDLIEKFSKRTVKVTKKHNEDCKRLLSLMGVPVVQAPGEAEAQCAALCENHKVFAIASED
MDSLTFGARRFLRHLTDLSFKRSPVTEFEVSKVLEELGLTMDQFIDLCILSGCDYCENIR
GIGGQRALKLIRQHGCIEEVVQNLSQTRYSVPEDWPYQEVRALFKEPNVCTDIPDFLWTP
PDEEGLINFLVAENNFSPDRVVKSVEKIKAANDNFSLGRGKLLAPVANLTGSTSTAGKEP
KCILGGPGQVMKARSPLQVCKSSSLNFIHDNSKAFMLGRRSGFHRISTYASI
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgggcatcaagggtttgacgaagctgctggcggagcacgcgccgggggcggcggtgagg
aggcgggtggaggattaccgcggccgcgtcgtcgccatagacgccagcctcagtatctac
cagttcctcattgtggtaggaaggaaaggaacagaagttctgaccaatgaggctggtgaa
gtcacaagtcatctgcagggcatgttgaaccgaactgttaggattctagaagcaggaata
aaacctgtttttgtgtttgatggtgagccacctgacatgaagaaaaaggaactggcaaaa
aggtctttgaagagagatggttcttccgaagatctaaatagagctattgaggttggagat
gaggatttaattgaaaaatttagcaaaaggactgtaaaggtcacaaaaaagcacaatgaa
gactgtaagaggctgttaagcttgatgggtgtccctgtagttcaggcaccaggggaggca
gaagcacagtgcgcagcactctgtgaaaatcacaaggtctttgctatagcttcggaggat
atggactctctaacttttggtgctagaaggtttcttcgccatttaaccgacctgagtttt
aagagatctcctgtaacagaattcgaagtgtcaaaggttttggaggaacttggactcaca
atggatcagttcattgatttgtgtatccttagtggctgtgactactgcgagaatattaga
ggtattgggggacagagagctttgaaacttattcgtcagcatggttgtatagaagaagta
gtgcaaaatcttagccagacaaggtatagtgtcccagaagactggccttaccaggaagtt
cgggcattgtttaaggaacctaacgtttgtacagatattccagacttcctgtggacccca
ccagatgaggagggccttataaactttttggtagccgaaaataatttcagtcctgatcga
gtagtaaagtctgtagaaaagataaaggctgctaatgataacttttcccttgggcgaggg
aagcttttggcaccagtagcgaacttaacaggatctacatcaactgcagggaaggaaccc
aaatgtatcctgggtggtccagggcaagtcatgaaggctaggtcacctctacaagtgtgc
aagagctcaagcttgaacttcatacatgacaattcaaaggcgttcatgctgggcaggcga
tcaggatttcacagaatatctacatatgcttccatctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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