KEGG   Oryza glaberrima (African rice): 127771861
Entry
127771861         CDS       T08853                                 
Name
(RefSeq) cysteine protease ATG4B isoform X1
  KO
K08342  cysteine protease ATG4 [EC:3.4.22.-]
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    127771861
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ogl01002]
    127771861
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogl04131]
    127771861
   03029 Mitochondrial biogenesis [BR:ogl03029]
    127771861
Peptidases and inhibitors [BR:ogl01002]
 Cysteine peptidases
  Family C54: Aut2 peptidase family
   127771861
Membrane trafficking [BR:ogl04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    127771861
Mitochondrial biogenesis [BR:ogl03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    127771861
SSDB
Motif
Pfam: Peptidase_C54
Other DBs
NCBI-GeneID: 127771861
NCBI-ProteinID: XP_052153758
Position
4:complement(30870008..30873466)
AA seq 477 aa
MTSLPDRGVSSSSSDPLCEGNIAPCSSSSEQKEDCSLKQSKTSILSCVFNSPFNIFEVHQ
DSSANKSPKSSSGSYDWSRVLRRIVCSGSMWRFLGTSKVLTSSDVWFLGKCYKLSSEESS
SDSDSESGHATFLEDFSSRIWITYRRGFDAISDSKYTSDVNWGCMVRSSQMLVAQALIFH
HLGRSWRRPSEKPYNPEYIGILHMFGDSEACAFSIHNLLQAGNSYGLAAGSWVGPYAMCR
AWQTLVRTNREQHEVVDGNESFPMALYVVSGDEDGERGGAPVVCIDVAAQLCCDFKGQST
WSPILLLVPLVLGLDKINPRYIPLLKETFTFPQSLGILGGKPGTSTYIAGVQDDRALYLD
PHEVQMAVDIAADNIEADTSSYHCSTVRDLALDLIDPSLAIGFYCRDKDDFDDFCSRATE
LVDKANGAPLFTVVQSVQPSKQMYNQDDVLGISGDGNINVEDLDASGETGEEEWQIL
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgacgagcttgcctgataggggtgtatcatcgtcttcatctgatccgttgtgcgagggt
aacattgcaccttgttcttctagctcggaacagaaggaggattgtagcctgaaacaatcg
aaaacctcgatcctgtcctgcgttttcaattcacctttcaatatctttgaggtgcaccag
gattcgtccgcaaacaagtcgccgaaatcgtcctctggatcctatgattggtcgagggta
ttgaggaggatcgtgtgctctggctcaatgtggcgttttctgggcacctccaaggttctc
acttcaagtgatgtgtggttccttggtaaatgttacaagctttcgtcggaggagtcgtct
agtgactcagattccgaaagtgggcatgccacatttcttgaggacttctcgtcaaggata
tggatcacttatcgcagaggctttgatgccatctctgattccaagtatactagtgatgtg
aactggggctgcatggtcagaagcagccagatgctggttgctcaggcattgattttccac
catcttggcagatcttggagaaggccctcggagaagccatataacccagaatatataggg
atcttacacatgtttggtgattctgaagcttgtgctttctcaattcacaatttacttcaa
gctggaaatagttatggtctggctgctggatcatgggtgggtccatacgccatgtgtcgg
gcatggcaaacccttgtccgcaccaatagggagcaacatgaagttgttgatgggaatgaa
agtttccctatggctctttatgtggtatccggtgatgaagatggtgaaagaggtggagct
ccagttgtttgtattgatgttgctgctcagctttgctgtgatttcaaaggtcaatcaact
tggtcaccgattcttttgctggtccctctggttcttggtcttgacaaaattaatccaagg
tacattcctttactaaaggagacgttcacatttcctcagagcttggggattttgggtgga
aagcctggaacatcaacctacattgctggggtacaggatgacagggcgctctacctagat
ccccatgaagttcagatggcagttgatattgcagctgataacatagaggcagacacttct
tcataccactgcagcactgtacgagatttggccctagacctgatagatccgtcattggct
attggtttttactgccgtgataaagatgacttcgatgatttctgttctcgcgccactgag
ctagtagataaagccaatggagcaccactcttcactgttgtgcagtcggttcaaccgtca
aaacaaatgtacaatcaggacgatgtgttgggcatctcaggggatggcaacatcaatgtc
gaggacctcgatgcctcaggtgaaacaggagaggaggaatggcagattctttag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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