KEGG   Oryza glaberrima (African rice): 127775574
Entry
127775574         CDS       T08853                                 
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 43-like
  KO
K03260  translation initiation factor 4G
Organism
ogl  Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogl03019]
    127775574
   03012 Translation factors [BR:ogl03012]
    127775574
Messenger RNA biogenesis [BR:ogl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     127775574
   mRNA cycle factors
    Stress granule specific factors
     127775574
Translation factors [BR:ogl03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    127775574
SSDB
Motif
Pfam: zf-CCCH MIF4G zf_CCCH_4 zf-CCCH_2 zf-CCCH_4 Torus
Other DBs
NCBI-GeneID: 127775574
NCBI-ProteinID: XP_052157793
Position
6:18614502..18619806
AA seq 708 aa
MPQDDDWFWGPTPVVVGETTSKPQPPVAGKTKKVEEQHPRRPGEPDCSYYVKFGSGKFGI
SCVYNHPDPRRQHGADDKKPEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQ
QEYFSGNACHCHHSEGKSKVKQVKLNVLGLPLRAGTGLCSYYMNRGICKFGTNCKFDHPD
PGSDHEKWVVSSNANQVSSQVNIYSVLDRGESNERTVTSEEVHQPWNPSFHLTERVSXTR
DQLLQLGQNVDVPKDILKCCQDINVELNGEEKIWGFGAEKDHVQTPSYKRFDATDSRDWH
SQSAQTHWEQKFWDNFSEAKEPYALGWKQEKFNKHDQSSFHFDSKDQWLKYRKCTPWKST
LVKAEVPLSIQRGIISGKDEVLKTLKSTLNTFTPKMFDLQKGQLIETRITSADILKDVIN
LIFEKVVAEPAFYSTYAQICTYLNQNLTPFPPEDCGEEITFKQALSSKCQEIFESARTVR
AEIDKLIGQDREMEQRDKERVVKLETLANIHFIRALLKKKLITNKIIDHIVQAVMECGRF
RFESLGKVDLLNIIFEGMLDSDSAGAESNICVNAMIGGNKSSIAENDVEMTCKNVNRQNE
EAILQKSYNEVPNNSMDPQKNYADGAFSYLVGNEKPTNFESSVRISRAGCSISEIMELVV
DAGAVEGSDEHFIATLLFIKPEYREIFLTLDTRQGRLGWLKRMYKVKE
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgcctcaggacgatgactggttctgggggcctactcccgtcgtcgtcggcgagacgacg
tcgaagccgcagccgccggtggcggggaagacgaagaaggtggaggagcagcacccacgg
cgacccggggagccggactgcagctactacgtcaagttcgggagcggcaagttcggcatc
agctgcgtgtacaaccacccggatccgaggcggcagcatggcgccgacgacaagaagccg
gagcagttcccgcggcggcccggcgagcccgactgcagctactacgtcaagttcgggagc
tgcaagtttgggatgaattgcaggttcaaccaccctccccgcatgccagtgccaccacaa
caagagtatttctctgggaatgcatgccactgccaccatagtgaaggcaaaagtaaagtt
aagcaagtaaagctgaacgttcttgggcttccacttcgtgctgggacagggttgtgctca
tactacatgaaccggggaatctgcaaatttggcactaactgcaagtttgaccacccagat
ccagggtcagatcatgagaagtgggtcgtttcaagtaatgccaatcaagtttcctctcag
gtgaacatttactcggtgcttgaccgtggagaatcgaatgagcgtactgttacctccgaa
gaagtccatcagccatggaatccaagttttcacctgactgaacgagtcagttagacaagg
gaccaacttctccaacttggtcagaatgtcgatgtgcccaaggacatcttaaaatgttgt
caagatattaatgttgaactcaatggtgaagaaaaaatttgggggtttggagcagagaaa
gatcatgtacaaactccatcatacaaacggtttgacgcgacagacagccgtgactggcat
tcacagtctgcacaaactcattgggaacagaaattctgggacaacttctctgaagcaaaa
gaaccctatgcattaggttggaagcaagagaaatttaacaagcatgaccaatcaagcttc
cactttgattctaaagatcagtggttaaaatatagaaagtgtacaccctggaaaagcact
cttgttaaggctgaagtccctttgtcaatccagagaggcattatctctggtaaagacgaa
gttctgaaaacattgaaaagtacactaaacacatttacaccaaagatgttcgatcttcag
aagggccagctaattgaaacaagaatcactagcgccgatattttgaaggatgttattaat
cttatatttgaaaaggttgtcgctgagccagccttctattcgacttatgcacaaatttgc
acttatctaaatcaaaacctcacaccattccctcctgaagattgtggtgaagaaattacg
ttcaaacaagcactgtcgagcaaatgtcaagaaatatttgaaagtgctcgcactgtacgt
gctgagattgacaaattgattggacaagaccgagagatggagcaacgggataaagaaagg
gtagttaaacttgaaacactggcaaatattcatttcattcgagccctgctcaagaaaaag
ttgatcacaaataagataatagatcacattgttcaggcagtgatggagtgtggtaggttt
cgctttgaatcacttggaaaagttgatttgctaaatataatatttgaaggcatgctggat
tcagattcagcaggagctgaatctaatatttgcgtcaatgctatgattggtggcaataaa
tcttccattgctgaaaatgatgtcgagatgacttgtaagaatgtcaataggcaaaatgaa
gaggcaatattacaaaaatcttataatgaagtcccgaataactcaatggatcctcagaaa
aattatgcagatggagcattcagttatcttgttgggaatgagaagccgaccaactttgaa
tcatctgtgaggatcagtcgagcagggtgcagtatttcagagataatggagttagttgtt
gatgcgggagctgtggaaggcagtgatgagcatttcattgctaccttattatttattaaa
cctgaatatagggaaatatttcttacccttgatacgcgtcaaggaagacttgggtggctg
aaaaggatgtacaaagtgaaggaataa

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