KEGG   Oryza glaberrima (African rice): 127776596
Entry
127776596         CDS       T08853                                 
Name
(RefSeq) nuclear poly(A) polymerase 1-like
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    127776596
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogl03019]
    127776596
Enzymes [BR:ogl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     127776596
Messenger RNA biogenesis [BR:ogl03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     127776596
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Nrap_D2
Other DBs
NCBI-GeneID: 127776596
NCBI-ProteinID: XP_052158990
Position
6:11606732..11613385
AA seq 748 aa
MAKSNNGNGYLGVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLD
QIVKAWIKKATRASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEY
FFQALYDMLVDMPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDS
ILHNVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGIN
WALLVARICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRD
RGHHMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFF
ESYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRP
LHCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPS
FVFPGGIRPSRPSRTVGKEARAVSRSNISANVQERNVPSMAQPMPYKSSEVNKIPSDPHG
GYQSQERNNAVVSSLPCEETGHMFNGYANLHTESVELEHLRSYKGSTSVPENHVVHDLVK
PPESMPPNSIHVYPSPTNGLGHLLDSSCKKPADIIVNKTTNFSSAVLAVPDELDELDSHQ
VKVNQKDLTAVDQGLSLEHKVGSNGGKAGTTGSPDNNHLKRKAEEELEPLELAAPLVRPP
APTSTTQRRPLRLRLSTVVQPKPAEGTS
NT seq 2247 nt   +upstreamnt  +downstreamnt
atggcgaagagtaacaatggtaatggctacctcggtgtgactgagccaatctcattgagt
ggcccaactgagaaggatgttgtccgcacgcaggaggttgagaagtgtcttgctgacgcc
ggcctgtatgaaagccaagaggaagctgtctcacgagaagaggttttaggcaaactggac
cagattgtcaaggcttggattaagaaggcaactcgagctagtggttttggcgaccaattt
gtgcaagaagcaaacgcaaagatttttacttttggctcataccgactaggggttcatggc
cctggtgcagatattgatacgctttgtgtgggtccaaggcatgcaactcgaactgaatac
tttttccaggctctttatgatatgctagttgatatgccagaggtcacagagttacatcca
gtgccagatgctcatgttcctgttttgaaattcaaacttaatggggtctctattgatctt
ttatatgctaatcttacacatgttgttattcctgaggacctggatctttcgcatgactct
atattgcacaacgttgacgaacaaactgtccgaagtcttaatggatgccgagttactgat
aaaattctacgattggttccaaatattctgactttccggacaaccttgagattcatgaga
ttttgggcaaaacgccgtggagtctactcaaatgttatagggtttcttggtggtataaac
tgggcacttcttgttgctcgtatatgtcaactatacccaaatgcatcaccaagcatgttg
atatctcgttttttcaaagtctacagcaagtggaagtggcctaatcctgttatgctttgc
catattgaagagggttctcttggtcttcttgtgtgggacccaaggagaaattttagagac
aggggtcatcatatgcctataattacacctgcttatcctagtatgaattctagctataat
gtatctatcagtactaggcatgtgatggtccaagaattcacacgagcttctgatatctgt
caggcaatagacgaaaggaaagcagactgggatgctttgtttgagccatatccatttttt
gaatcgtatagaaattatctaaagattgagatcacagcaagaaatgaagatgacctcagg
aattggaaaggttgggtagaatcccggcttcgtacgcttgtattaaagattgaacgattt
acacgtgagatgctcctctcacatcctaatcctagagatttcatcgacagctccaggcca
ttgcattgtttttactttatgggtctctggaaaaaacaaatcagccaagctcaagaagct
gagcagtatgacattagagcaattgtgaatgaatttaaaagcaatatccatgcatatcaa
cactggagagaaggaatggaaattgaagtttcccatgtaaaaagaaaagatatcccatca
tttgtttttcctggtggaatccgtccttctcgcccatcaagaacagttggcaaggaagct
cgggctgtttcaagaagtaatatttcagctaatgttcaagaaagaaatgttccaagcatg
gcccagcctatgccatataagagtagtgaagtaaacaaaattccgtcagatcctcatggt
ggctatcagtcgcaagaaagaaataatgcagtggtctctagtttgccctgtgaagaaact
ggccatatgttcaatgggtatgcaaatctccatacagaatctgttgagctggaacacttg
agaagctacaagggaagtacatctgttcctgagaaccatgttgtgcatgatttagtcaag
ccaccagagagcatgccacctaactcaatccatgtttatccaagtccaacaaatggattg
ggccatcttttagatagttcttgtaaaaaaccagcagacatcattgtaaataaaaccaca
aatttctcttcagctgtcctagcagtacctgatgaacttgatgagctggattctcatcaa
gtgaaggtaaatcagaaagatttaactgcagtagatcaaggattatctttggagcataaa
gttggaagtaatgggggcaaagcaggaaccacaggttcacctgacaacaatcatctgaag
cgtaaagctgaggaagagcttgagccacttgagcttgctgccccactagttcgccctcct
gcaccaacgtccacgacccagaggaggcccttgagactgagattgtcaactgtggtgcaa
cccaaacctgctgaaggaacttcatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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