KEGG   Oryza glaberrima (African rice): 127779131
Entry
127779131         CDS       T08853                                 
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like isoform X1
  KO
K12890  serine/arginine-rich splicing factor 1
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127779131
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ogl03041]
    127779131
Spliceosome [BR:ogl03041]
 Common components
  Common spliceosomal components
   SR proteins
    127779131
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_3
Other DBs
NCBI-GeneID: 127779131
NCBI-ProteinID: XP_052161788
Position
7:complement(25418131..25422561)
AA seq 367 aa
MRPNQLRPYEYTTRVYDVRHDQTPRLVSSPRLASSPAACAEQPPISATRAAAPASCYFRR
VLAEGRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVELLV
YFWILLNILTVYICCLAMKFEDPRDAEDAIRGRDGYNFDGNRLRVELAHGGRGNSSSFNN
SGGGGRRGGVSRHTEYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDY
TNYDDMKYAIRKLDDSEFKNAFSKAYIRVKEYDGKRSRSYSRSRSRSRGRSYSRSRSPSK
SPKGKSSRRSASRSRSRSASSRSRSESKGRSPSRSPARSESPNTSPANGDAASPKKRSPS
RSPPQET
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgcggcccaaccaacttaggccatatgaatacaccacacgagtatacgacgtcagacac
gaccaaacccctcgtctcgtctcgtcgcctcgcctcgcgagttcgcccgccgcctgcgcc
gagcagccgccgatctccgccacgcgagcagcggcgccggcgtcctgctacttccgccgt
gtcctcgccgaaggaaggatgagtaggcgctggagcaggacaatttatgtcgggaacctc
ccgggcgacatcagggagagggaggtagaggatctgttctacaagtatggacgcattgtt
gatattgacttgaagatccccccaaggccgcctggttttgcttttgttgagctacttgtc
tacttttggattttattgaatatccttactgtctatatttgttgccttgccatgaagttc
gaagatccccgtgatgctgaagatgcaatccgtggacgggatggctataattttgatggg
aaccgtttgagggtggaacttgcacatggtgggagaggtaactcttcctcctttaacaat
tctggtggagggggacgtcgcgggggtgtatctaggcatacagagtatcgcgttctggtt
actggactaccttcttcagcatcatggcaagacctaaaggaccatatgcgaaatgctggt
gatgtttgttactctgaagtgtaccgtgagggtggtggtactataggaattgtagactac
acaaactatgatgacatgaagtatgctatcaggaaacttgatgattctgaatttaagaat
gccttctcaaaggcctatataagggtgaaggagtatgatggaaagcgcagccgttcatac
tcacgaagccgaagccgaagtcgaggtcgcagctacagcagaagcaggagtccaagcaag
tctcccaagggaaagtcatcacgccgttcagcatctagatctcgatcgagatcagcttct
tcccgttcaagatcagagtcaaaggggcgctctccatcaagatcaccagcaagatctgag
tctccaaatacctctcctgccaatggtgatgcagcaagccccaagaaacgcagcccaagc
aggagccccccccaagaaacgtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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