KEGG   Opisthocomus hoazin (hoatzin): 104326896
Entry
104326896         CDS       T08436                                 
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
oha  Opisthocomus hoazin (hoatzin)
Pathway
oha04010  MAPK signaling pathway
oha04020  Calcium signaling pathway
oha04510  Focal adhesion
oha04518  Integrin signaling
oha04519  Cadherin signaling
oha04540  Gap junction
oha04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:oha00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    104326896 (PDGFRB)
   04020 Calcium signaling pathway
    104326896 (PDGFRB)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    104326896 (PDGFRB)
   04519 Cadherin signaling
    104326896 (PDGFRB)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104326896 (PDGFRB)
   04540 Gap junction
    104326896 (PDGFRB)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    104326896 (PDGFRB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:oha01001]
    104326896 (PDGFRB)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:oha04090]
    104326896 (PDGFRB)
Enzymes [BR:oha01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     104326896 (PDGFRB)
Protein kinases [BR:oha01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   104326896 (PDGFRB)
CD molecules [BR:oha04090]
 Proteins
  104326896 (PDGFRB)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Ig_PDGFR_d4 Pkinase Ig_3 I-set ig VEGFR1-3_N_Ig-like Ig_2 Ig_VEGFR-1-like_5th V-set VEGFR-1-like_Ig-like C2-set_2 DUF3944
Other DBs
NCBI-GeneID: 104326896
NCBI-ProteinID: XP_009930034
Position
Unknown
AA seq 1093 aa
MLVPSLKTSLWLLILTGLLEVTSGGSGLHIEPGDTELVLGLHSTFSLLCYGDGALVWERE
GQPLAASLEHRDGVFVSNLTLRNVTGRHTGEYVCTYSPDQAPEPAERKALYIYVPDPSLV
FLPTITSEELFIFITGYTEAIIPCRVTNPHMQVTLYEKKVENPIPAAYDPQQGFKGFFED
KTYFCRTIVDDQEVDSDTFYVYRIQVSSVNVSISAVQTIVRQGENITLMCTVSGNELVNF
NWDYPRKQAGKAVEPVTDFLPGSTHEIRSILIIQNAELEDSGTYICNVSEGYHEKMDRKD
ITIHVIEHGFVRFHTRLPSTVYAEVHKSHTIQVEVEAYPQPSIMWLKNNKTLTMESSSEF
TITSRNLSETRYQTALVLVRVKQEEGGFYTIRASNEDDEQELSFHLQINVPAKVVDLKEN
SSASSGEQTVTCSAEGMPQPEISWSTCSDIKLCSTRGQPTRLLGNQSAEVGLQTKATYHA
ELQVYRVNSTLQLHRVDEPLLLRCTVQNFLGTNSQDITLVPHALPFKVVIISVILALLVL
TVISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDKLVLGR
TLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQSYGEKARREAEVYGNTVKDDHV
QSHLSLSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIESSNYGTPYELDSYSPSAPE
RTDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMSKPTHASDEIYDIMQKCWEEKFEIRPSFSQLVVLMGNLLVD
CYRKRYQQVDEEFMKSDHPAVVRTRPTVPGLNNARLTPSSPTNSILYTSVHQNGGENDYI
IPLPDPKPEAICDLPQEASISRASSMLNEANTSSTISCDSPLGLRQDEEQESDPQPGCQE
PTTGHQEVEESFL
NT seq 3282 nt   +upstreamnt  +downstreamnt
atgctggtcccctctctgaagacatcgctctggctcctcatcctcaccggtctgctggag
gtaacgtctgggggcagcgggctgcacattgaacccggagacactgagcttgtcctcggc
ctccacagcaccttctccctcttgtgctatggggacggcgcactggtctgggaacgggag
ggtcagccccttgctgcctcactggagcacagggatggtgtcttcgtcagcaacctcacc
ctcaggaacgtgacgggccgtcacaccggggagtacgtgtgcacctacagccccgaccag
gctccggagccggcggagaggaaagccctgtacatttacgttccagatccctccctagtc
ttcctccccacaatcacctctgaagagctcttcatcttcatcacgggctacacagaggcc
atcatcccatgccgcgtgaccaacccacacatgcaggtgaccctctacgagaaaaaggtg
gagaaccccatcccagctgcttatgacccacaacagggattcaaaggcttctttgaggat
aagacctatttctgtcggacaattgtggatgaccaggaggtggattcagacaccttctac
gtctacagaatccaggtctcatccgtgaacgtctccatcagcgcagtgcagaccatagtg
cgtcaaggagaaaacattaccctaatgtgcactgtgagcggcaatgagctggtcaacttc
aactgggattatccccgcaagcaagcagggaaggctgtggagccggtgaccgacttcctg
cccggatccacccacgagatccgctccattctcatcatccagaacgcagagctagaggac
agtgggacctacatctgcaacgtctctgagggctaccatgagaaaatggaccggaaagac
atcaccatccacgtgattgagcatggctttgtgcgcttccacacccgcctgcccagcaca
gtgtacgctgaggtccacaaaagccacaccatccaggtggaggtggaggcctacccgcaa
cccagcatcatgtggctgaagaacaacaagacgttgaccatggaaagcagcagtgagttc
accatcaccagcaggaacctgtcagaaaccaggtaccagacggctctggtgctggtgcgg
gtgaagcaggaagaaggaggattttacaccatccgggcttccaatgaggatgatgagcag
gagctgtccttccatctgcagataaatgtgccagccaaagtggtggatctcaaggagaac
agcagtgccagcagcggggagcagaccgtaacatgctctgctgaaggcatgccccagcca
gagatcagctggtctacttgcagcgacatcaaattgtgcagcaccaggggtcagcccacc
cgtctgctggggaaccagtccgcagaggtcggtctgcagaccaaagccacgtaccacgcg
gagctgcaggtctaccgcgtgaacagcacgctgcagctgcacagggtggacgagcccctg
ctcctgagatgcactgtgcaaaacttcctgggcaccaactcacaggacatcactctggtc
ccacacgccttaccattcaaggtggtcatcatctctgtcatcctggccttgctggtcctc
accgtcatctccctgatcatcctgatcgtcctgtggcagaagaaacctcgttatgaaatc
cgctggaaggtgattgagtcagtcagctccgatgggcacgagtacatctacgtggatccc
atgcagctcccttacgactccagctgggaggtgcccagggacaagctggtgttagggcgc
actcttggctccggtgccttcggacgtgtggtggaggcaacagcccatggcctgagccat
tcgcagtccaccatgaaagtagcagtcaaaatgctcaagtccaccgcccggagcagcgag
aagcaagctctcatgtctgagctgaagatcatgagccacctgggtcctcacctcaacatc
gtcaacttgctgggggcctgcaccaaaggaggacccatctatatcatcaccgagtactgc
cgctacggggacctggtggactacctgcaccgcaacaagcacaccttcctgcagtcctac
ggggagaaggcccggcgggaggcagaggtgtatgggaacacagtcaaggacgaccacgtg
cagagtcacctctccttgtctgtggagagcgacgggggctacatggacatgagcaaggat
gactccctggattatgtgcccatgtctgacatgaagggtgaagtcaagtacgctgacatc
gagtcctctaactacggcaccccatacgagctggacagctattccccgtcagctcctgaa
agaacagaccgggtgacgctgataaatgagtccccactcctcagctacatggacttggtg
ggcttcagcttccaggtggccaatgggatggagttcctggcttccaaaaactgtgtgcat
cgtgacctggctgccaggaatgtcctcatctgtgaggggaagctggtgaagatctgcgac
tttggcctggcaagggacatcatgagggattccaactatatctccaaaggcagtaccttc
ttgcccctaaagtggatggctccagagagcatcttcaacaacctctacactaccctgagt
gatgtgtggtcctttgggattctcctgtgggagatattcactctagggggaactccatac
cccgaactgcctatgaacgaacagttctataacgccattaaacgtggctatcggatgtcc
aaacccacccacgcctctgatgaaatctacgatatcatgcagaagtgctgggaggagaag
tttgagatcagaccatccttctcacagctggtggtgcttatgggaaacctcttggtggat
tgctacagaaagaggtaccagcaggtggatgaagagttcatgaagagtgaccaccccgct
gttgtccgcacaagacccacagtccctgggctgaacaacgccaggctcactcccagctcc
cccaccaacagcatcctctacacgtccgtgcaccagaacgggggcgagaacgattatatc
atccctcttcccgaccccaaacctgaggcaatctgcgatctccctcaggaggcctccatc
agccgggccagctctatgttgaatgaggccaacacatcatctacaatatcctgtgacagc
cctctgggcctccggcaggatgaggagcaggaatccgacccacagccaggctgccaggag
ccgaccacagggcaccaagaggtggaggagagtttcctgtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (13)   
   Pfam (13)   
All databases (19)   

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