KEGG T11549: 118164720

Oxyura jamaicensis (ruddy duck): 118164720

Entry

118164720         CDS       T11549

Symbol

PAPOLG

Name

(RefSeq) poly(A) polymerase gamma isoform X1

K14376

poly(A) polymerase [EC:2.7.7.19]

Organism

oja Oxyura jamaicensis (ruddy duck)

Pathway

oja03015

mRNA surveillance pathway

Brite

KEGG Orthology (KO) [BR:oja00001]
09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    118164720 (PAPOLG)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oja03019]
    118164720 (PAPOLG)
Enzymes [BR:oja01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     118164720 (PAPOLG)
Messenger RNA biogenesis [BR:oja03019]
Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     118164720 (PAPOLG)

SSDB

Motif

Pfam:

PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central DUF4269 Nrap_D2

Other DBs

NCBI-GeneID:

118164720

NCBI-ProteinID:

XP_035178325

Position

3:join(4157598..4157614,4159388..4159546,4159614..4159680,4160306..4160387,4160471..4160580,4162667..4162720,4163770..4163881,4164495..4164584,4165142..4165280,4165433..4165505,4165588..4165708,4166015..4166099,4166489..4166542,4168245..4168364,4168666..4168775,4171236..4171357,4171439..4171605,4172468..4172574,4172649..4172869,4173690..4173761,4174347..4174403,4175181..4175279)

AA seq 745 aa
MKETGGTSMLQNQPQRHYGITSPISLAPPKDIDYIHTQKLVEAMKPFGVFEDEEELNHRL
VVLGKLNNLVKEWISELGESKNLPPSVVANVGGKIFTFGSYRLGVHTKGADIDALCVAPR
HVERSDFFQSLFEKLKHQEEIKNLRAVEDAYVPVVKFEFDGIEIDLVFARLSVQTISDNL
DLRDDSSLRSLDIRCIRSLNGCRVTDEILHLVPNQENFRLTLRAIKLWAKRRGIYSNMLG
FLGGVSWAMLVARTCQLYPNALASTLVNKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDP
RVNPSDRYHVMPIITPAYPQQNSTYNVSTSTRAVMVEEFKHGLAVTNEILQGKLDWPKLL
EPPNFFQKYKHYIVLTASAYTEEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSFP
GNQEHRKQGGYVSMWFLGIIFRKVESAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK
IEAAHVKRKHLHYFLPPETLQKRKKQSVPDTSQNASGLQCKRASSDGSLDSSRDTDSRTP
CSSPSLNRISKLDTSTAEMERSAVIQRTRGASNREKTNHVAVPPASTEISIPVIGSKMEA
AVAVRPSGPPAGCTVPAVIEHNMISRLRTHFVQGQHELSGTQITNLKSAVPKRPHSPTSE
YPKRPKDREKLTGQDSVFRDGGNPEDVKRRSTENVGLGGKSVLIPVLDTSRSQRLSSKEL
PDSSSPVPTTNIRIIKRSIRLTLNR

NT seq 2238 nt +upstreamnt +downstreamnt
atgaaggagacgggcggtacctctatgctgcagaaccagcctcaaaggcactatggaatt
acctctccaattagcttggctcctcctaaggatatagattatattcatactcagaagcta
gttgaagcaatgaagccatttggggtgtttgaagatgaagaagaactgaatcacaggctg
gttgttcttggtaaactgaataacttggtcaaagaatggatttcagaacttggtgagagc
aagaatcttcccccttcagttgtagcaaatgttggtggcaaaatatttacatttggttct
tacaggcttggagtacacaccaaaggtgctgacatagatgctctttgtgttgctcctaga
catgtggaaagatcggatttctttcagtcactctttgaaaaactaaagcatcaagaagaa
ataaaaaatctaagagcagtagaagatgcctatgtaccagttgtcaagtttgagtttgat
ggcattgagattgatctcgtgttcgcaagactgtctgtgcaaactatttctgataatctt
gatctaagagatgactccagtctaagaagcctggatataagatgcatacggagcttaaat
ggctgcagagttactgatgaaatactacatctagtgccaaatcaagagaacttccggctc
acgctccgtgcgattaaactgtgggcaaaacgacgtggtatttactccaatatgctggga
tttcttggtggagtttcctgggcaatgctagtagcaagaacatgtcaactctatccaaat
gcattggcgtctactcttgtgaacaagttcttcttggttttctcaaaatgggaatggcca
aatcctgttttgctgaaacaacctgaagagagtaatcttaacttaccagtatgggaccct
agggtcaacccatcagacaggtatcatgtaatgcctatcatcaccccagcctatccacag
cagaactctacatacaacgtatctacatcaacgcgagctgtaatggtagaggagttcaaa
cacggtcttgcagtaacaaatgagattcttcaaggaaagctagactggccaaagctcctt
gagccaccaaacttctttcagaagtacaaacattatattgtactgactgctagtgcctat
actgaagagcatcacttagaatgggttggccttgttgaatctaaaattcgtgtgctggtt
ggaaacctggagagaaatgagtttataaatattgcacatgtaaatccccagtctttccct
ggcaaccaagaacaccgtaaacagggtggctatgtgtcaatgtggtttcttggaatcata
tttaggaaagtggaaagtgcagaaagtgttaacattgatttgacatatgatatacagtca
ttcacagatacagtttacaggcaggctaacaacatcaacatgctaaaggaaggtatgaag
attgaggcggctcacgtgaagagaaagcatctccattattttctgcctccagaaacctta
cagaaaagaaagaagcaaagcgtgccagatactagtcaaaatgctagtgggcttcagtgt
aaaagggcctcttcagatggaagcttggacagttccagagacacggactccagaacacca
tgtagttccccttcattaaataggatatctaaattggacacctctacagcagagatggaa
agaagtgctgtgattcagagaactaggggcgctagcaacagagagaagacgaatcatgta
gctgtgccaccagcgtctacggaaatctccattccagttattggttcaaaaatggaggct
gcagttgcagtaagaccatcaggacctccagctggctgcactgtgcctgcagtaatagaa
cataacatgatttctcgacttaggacacactttgtccaaggacagcatgaactaagtgga
actcaaattacaaatttgaagagtgctgtacctaaacgacctcattcacctacctcagaa
taccctaagagaccaaaagacagagaaaagttaactggccaggattcagtattcagagac
ggtggtaatccagaagatgtaaagagaagatctacagaaaatgttggccttggaggaaaa
tctgtgctaattccagttcttgacacatcaaggtcacagagactttccagtaaagagcta
ccagattcttcatctcctgttccaacaactaatattcgtattattaaaagatccatcaga
cttacccttaaccggtaa

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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