KEGG   Oxyura jamaicensis (ruddy duck): 118174744
Entry
118174744         CDS       T11549                                 
Symbol
POP5
Name
(RefSeq) ribonuclease P/MRP protein subunit POP5
  KO
K03537  ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:oja00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    118174744 (POP5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oja03009]
    118174744 (POP5)
   03016 Transfer RNA biogenesis [BR:oja03016]
    118174744 (POP5)
   03029 Mitochondrial biogenesis [BR:oja03029]
    118174744 (POP5)
Enzymes [BR:oja01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     118174744 (POP5)
Ribosome biogenesis [BR:oja03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     118174744 (POP5)
Transfer RNA biogenesis [BR:oja03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    118174744 (POP5)
Mitochondrial biogenesis [BR:oja03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    118174744 (POP5)
SSDB
Motif
Pfam: RNase_P_Rpp14
Other DBs
NCBI-GeneID: 118174744
NCBI-ProteinID: XP_035196232
Position
15:complement(join(7811948..7812051,7812228..7812311,7812728..7812877,7813394..7813536,7813606..7813625))
AA seq 166 aa
MVRFKNRYVLCEVVAEEPRGRPCIEDRAVGSAVRDAIARAYGDYGLACCSVSFTVKYLNA
YTGTVLLRCRKDFYRLLCSALPLVRQLESRGLRCPCFLSTLHVGGTIRSCQKFLIQHNRR
QLLTLLQNCTNEEERQRIRQSVLSCSLMEEQPPSGDEEEDDGTETD
NT seq 501 nt   +upstreamnt  +downstreamnt
atggttcgcttcaagaacaggtacgtgctgtgcgaggtggtggccgaggagccccggggc
cggccctgcatcgaggaccgcgccgtgggcagcgccgtcagggacgccatcgcgcgggcc
tacggggactacgggctggcctgctgctccgtgtccttcacagtgaagtacctgaacgcc
tacacgggcaccgtgctgctgcgctgccgcaaggacttctaccggctgctgtgctcggcg
ctgccgctcgtcaggcagctggagagccgcgggctgcgctgcccctgcttcctcagcacc
ctgcacgtcggaggtaccataaggtcatgtcagaagtttctaatccagcataacagaaga
cagctgctgacgttgttgcaaaactgcacaaacgaagaggaaagacagcgcatccggcag
tcagtgctgagctgttcccttatggaagagcagcctccaagtggagatgaggaagaggat
gatggcacagagacagactga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (5)   

Download RDF
DBGET integrated database retrieval system