KEGG   Oxyura jamaicensis (ruddy duck): 118175372
Entry
118175372         CDS       T11549                                 
Symbol
TUBB4B
Name
(RefSeq) tubulin beta-4B chain
  KO
K07375  tubulin beta
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04145  Phagocytosis
oja04517  IgSF CAM signaling
oja04540  Gap junction
oja04814  Motor proteins
oja05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oja00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    118175372 (TUBB4B)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    118175372 (TUBB4B)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    118175372 (TUBB4B)
  09142 Cell motility
   04814 Motor proteins
    118175372 (TUBB4B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118175372 (TUBB4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oja03036]
    118175372 (TUBB4B)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oja04812]
    118175372 (TUBB4B)
   04147 Exosome [BR:oja04147]
    118175372 (TUBB4B)
Chromosome and associated proteins [BR:oja03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     118175372 (TUBB4B)
Cytoskeleton proteins [BR:oja04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    118175372 (TUBB4B)
Exosome [BR:oja04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   118175372 (TUBB4B)
  Exosomal proteins of colorectal cancer cells
   118175372 (TUBB4B)
  Exosomal proteins of bladder cancer cells
   118175372 (TUBB4B)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 118175372
NCBI-ProteinID: XP_035197494
Position
17:complement(1938873..1941115)
AA seq 445 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEEEAE
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggagatcgtgcacctgcaggccgggcagtgcggcaaccagatcggggccaagttc
tgggaggtgatcagcgacgagcatggcatcgatcccaccggcacctaccacggcgacagc
gacctgcagctggagcgcatcaacgtgtactacaatgaggccacaggtggcaagtacgtg
cctcgcgccgtgctggtggacctggagcccggcaccatggactcggtgcgctccgggccc
ttcgggcagatcttcaggccggacaacttcgtgttcggtcagagcggagcaggaaacaac
tgggcaaagggccattatacggaaggtgctgaattagttgattccgtattagatgttgta
agaaaggaggcagaaagctgtgattgcctccagggctttcagctgactcactcccttggt
ggtggtactggctctggtatgggtaccctcctaatcagcaaaattcgtgaagagtaccca
gaccgaattatgaatactttcagtgttgtaccttcccctaaagtctcagatactgtagta
gagccgtacaatgccacgctgtcggtgcaccagcttgtggagaacacagatgaaacatac
tgtattgataacgaagcactctatgacatatgcttcagaacactgaagttaactacgcca
acatacggtgatctgaaccatttagtgtcagcgaccatgagcggtgttaccacctgcctg
cgtttcccaggccagcttaatgctgacctgcggaagctggcagtcaacatggttcccttc
ccccgtttgcactttttcatgcctggttttgccccgctcacaagccgtgggagccagcaa
taccgtgctctgactgtaccagagctaacgcagcagatgtttgatgcaaagaacatgatg
gctgcgtgtgacccacgtcacggccgctatctgactgtagctgctgtgtttagaggccgt
atgtcaatgaaagaggtcgatgagcaaatgctgaacgttcagaacaaaaatagcagctac
tttgtcgaatggattcctaataacgttaaaacagcggtctgtgacattccacctcgtggc
ctgaaaatgtctgccacgttcattggtaacagcacagctatccaggagctgttcaaacgc
atctctgagcagttcactgctatgttccgccgaaaggctttcctgcactggtacacaggc
gagggcatggatgagatggaattcacagaggctgagagcaacatgaacgacctggtgtct
gagtaccagcagtaccaggatgctacagctgaggaggagggggagtttgaggaggaggct
gaggaagaggcagagtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system