KEGG   Oncorhynchus keta (chum salmon): 118372441
Entry
118372441         CDS       T09424                                 
Name
(RefSeq) tubulin beta-3 chain
  KO
K07375  tubulin beta
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04145  Phagocytosis
oke04517  IgSF CAM signaling
oke04540  Gap junction
oke04814  Motor proteins
oke05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    118372441
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    118372441
  09144 Cellular community - eukaryotes
   04540 Gap junction
    118372441
  09142 Cell motility
   04814 Motor proteins
    118372441
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118372441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oke03036]
    118372441
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oke04812]
    118372441
   04147 Exosome [BR:oke04147]
    118372441
Chromosome and associated proteins [BR:oke03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     118372441
Cytoskeleton proteins [BR:oke04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    118372441
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   118372441
  Exosomal proteins of colorectal cancer cells
   118372441
  Exosomal proteins of bladder cancer cells
   118372441
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2 TrmK
Other DBs
NCBI-GeneID: 118372441
NCBI-ProteinID: XP_035614228
Position
2:71961253..71967297
AA seq 449 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGISPTGNYEGDSPLQLERISVYYNEASSSKYV
PRAILVDLEPGTMDSVRSGTYGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSIHQLLENTDETYCIDNEALYDICFRTLKLPTPTYGDLNHLVSATMSGVTTSF
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSACYNALSVPELTQQLFDAKNMM
AACDPRHGRYLTVAMVFRGQMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCNIPPRG
LKMSATFIGNNTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATTEEEGEMYEDDEEESESQAR
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgagagaaattgttcaccttcaagccggccagtgtggcaaccagatcggagccaagttc
tgggaggtgatcagtgatgaacatggcatcagccctacagggaactatgagggcgactcc
ccactgcagctggagaggatcagtgtctactacaatgaggcctcatcctctaagtacgtc
cccagggccatcctagtagacctggagccaggaactatggacagtgttcgctctgggacc
tacggacaactcttcagaccagacaatttcatcttcggtcagagtggagctggtaacaac
tgggccaagggccactacacagagggagcagagctggtggactcagtactggacgtagtc
aggaaggaatgtgagaactgtgactgtctccagggcttccagctcacccactccctcgga
gggggcacaggctctggcatggggaccctgctcatcagcaagatccgggaagagtaccct
gaccgcatcatgaacaccttcagcgtggtgccctcccctaaagtatcagacacagtggtg
gagccctacaatgccaccctgtccatccatcagctgctggagaacacagacgaaacctac
tgcattgacaatgaggcgctttatgacatctgcttccgcacgctcaagctccccacgccc
acctatggagacctcaaccacctggtgtcggccactatgagcggtgttactacctccttc
cgcttccccggccagctcaatgctgacctccgcaaactggctgtcaacatggtgcccttc
ccccgtctgcacttcttcatgcctggcttcgcccccctcacggcgcgtggcagtgcgtgc
tacaatgcactgtctgtacccgagctcacccagcagttgtttgatgccaagaacatgatg
gccgcttgcgacccgcgtcacggacgctacctgaccgtggccatggtgttccgaggtcag
atgtccatgaaggaggtggacgaacagatgttggccatccagagtaagaacagcagctac
ttcgtcgaatggatccccaacaacgtcaaagtggccgtctgtaacatcccgccccgcggt
ctcaagatgtccgccaccttcatcgggaacaacacggccatccaggagctgttcaagcgc
atctccgagcagttcaccgccatgtttcgccgcaaggcgttcctgcactggtacaccgga
gagggcatggacgagatggagttcaccgaggcagagagcaacatgaacgacctggtgtca
gagtaccagcagtaccaggacgctaccaccgaggaggagggagagatgtatgaagacgat
gaggaagagtcagagagccaggcccggtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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