KEGG   Oncorhynchus kisutch (coho salmon): 109903619
Entry
109903619         CDS       T09179                                 
Name
(RefSeq) tubulin beta chain
  KO
K07375  tubulin beta
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04145  Phagocytosis
oki04517  IgSF CAM signaling
oki04540  Gap junction
oki04814  Motor proteins
oki05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oki00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    109903619
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    109903619
  09144 Cellular community - eukaryotes
   04540 Gap junction
    109903619
  09142 Cell motility
   04814 Motor proteins
    109903619
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109903619
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oki03036]
    109903619
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oki04812]
    109903619
   04147 Exosome [BR:oki04147]
    109903619
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     109903619
Cytoskeleton proteins [BR:oki04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    109903619
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109903619
  Exosomal proteins of colorectal cancer cells
   109903619
  Exosomal proteins of bladder cancer cells
   109903619
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2 DUF5008
Other DBs
NCBI-GeneID: 109903619
NCBI-ProteinID: XP_020356030
Position
LG14:complement(55802362..55807784)
AA seq 444 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEASGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEEDA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgagggaaattgtacacattcaggccgggcagtgcggtaaccagattggggccaagttc
tgggaggtgatcagcgacgaacatggcatcgaccccacaggcacctaccatggagacagt
gacctgcagctggacaggatcagtgtctactacaacgaggcttcaggtggcaagtatgta
cccagagcggtcttagtggacctggagcccggcaccatggactctgtcagatccggaccg
ttcgggcagatcttcagaccagacaacttcgtgtttggtcagagcggtgcaggaaacaac
tgggcaaagggccactacactgagggagcagagctggtggactcagtcctggatgtggtg
aggaaagaggcggagagctgcgactgcctccagggtttccagctcacccactccctgggt
gggggcactggctcgggcatgggcaccctgctcatcagcaagatccgtgaagagtacccc
gaccgcatcatgaacaccttcagcgttgtgccctcccctaaagtgtcagacactgtggtg
gagccctacaatgccaccctgtcagtccaccagctagtggagaacacagacgagaccttc
tgcattgacaacgaggctctctacgacatctgcttccggaccctcaaactcaccacgccg
acttacggagacctcaaccacctggtgtcggccaccatgagcggagtcaccacttgcctg
cgtttccccggtcagctcaacgccgacctccgtaaactggctgtcaacatggtgcctttc
ccccgtctccacttcttcatccccggcttcgcacccctcaccagcagggggagccagcag
taccgtgccctcaccgtgcctgagctcactcagcaagtgttcgacgccaagaacatgatg
gccgcatgtgacccgcgccacggtcgctacctcactgtcgccgctgtcttccgtggccgc
atgtccatgaaggaggtggacgagcagatgctcaacgtccagaacaagaacagcagctac
tttgttgaatggatccccaacaacgtcaagaccgctgtctgcgacattcctccaagaggc
ctcaaaatggccgtcaccttcatcggcaacagcacggccatccaggagctgttcaagcgt
atctctgagcagttcaccgccatgttccgccgcaaggccttcctccattggtacactgga
gagggcatggacgagatggagttcactgaggcagagagcaacatgaacgacctggtgtct
gagtaccagcagtaccaggacgccaccgccgaggaggaaggtgagtttgaggaggaggct
gaggaggacgcttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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