KEGG   Oryzias latipes (Japanese medaka): 101157478
Entry
101157478         CDS       T02443                                 
Symbol
papolg
Name
(RefSeq) poly(A) polymerase gamma isoform X2
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101157478 (papolg)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ola03019]
    101157478 (papolg)
Enzymes [BR:ola01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     101157478 (papolg)
Messenger RNA biogenesis [BR:ola03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     101157478 (papolg)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central DUF4269 Nrap_D2 GH97_C
Other DBs
NCBI-GeneID: 101157478
NCBI-ProteinID: XP_004077012
UniProt: H2L7Z4
Position
15:7312054..7334843
AA seq 834 aa
MKEMSSAMPSGQQQPPQKHYGITSAISLAPPREIDHEYTRKLCEAMQPFGVFEDEEELNH
RLAVLGKLNNFVKEWIAEISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVA
PRHVDRSDFFQSFFEKLKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPD
NLDLRGDSILKNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNM
LGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVW
DPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWPK
LFEPPSFFQKYKHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEYITLAHVNPQS
FPGSKENRSENDFVCMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDG
MKIEATHVKKKQLHQYLPPELVQRKKRSIAEVNRGSNGGNPKRLSLDNSHLDSSRDTDSG
TPFSSPTSKALKPPSDPDDGPPKQLVVESPPTPSAAAAAAGDPGMSLPAIGSKPPSKTKP
PSPPASGAINTVPSADVNPSATSSPKEEPNGLEEPVNGGATKRPHSPTQEDLAKKPRSTD
VVSSDDAAFKEPYPPSSDSHPAGDAPSTPPHSGSKEKPIPTIDTSRTQRLPSMELPDASS
PLPASNSCRVVKNSIKLALNRHSITPPKPPMFDDSLSSDPAPASEEKGMSIPVIGSKHVA
PKSVAPPVGSSIPTLVSRVVDPLNGAGSKRPHSPSLEEQAKRLKETEKARIHIA
NT seq 2505 nt   +upstreamnt  +downstreamnt
atgaaagaaatgtcaagcgccatgcctagtgggcagcagcagccgccccagaaacactat
gggatcacctctgccattagtctcgcgcccccacgagaaattgaccacgagtacaccaga
aagctctgtgaggccatgcaaccatttggggtttttgaagatgaggaggagctgaaccac
agacttgctgttcttgggaaactgaacaactttgtaaaggaatggatcgcagagatcagt
gaattaaagaaccttcctccatcggctatcagctgcgtcggaggcaaaatattcacattt
ggctcctacagactcggagtgcacacaaaaggagccgacatcgacgccttatgtgttgct
ccacgccacgtagacagaagcgactttttccagtctttctttgagaagttaaaacaacat
gaagagattaaagatctcagggctgttgaggacgcgtttgtaccggtgataaaattcaag
tttgatgggattgagattgacttgctatttgccagactggccttacagtccattccagat
aacctggatttgagaggagactccatcctgaagaacctggacatccgctgtatccgcagc
ctgaacggttgtcgagttacagatgaaattttgtacctggtgccaaacaaagagaacttt
agactgacgttaagggccatcaaactgtgggcgaaacgtcgaggaatctactccaacatg
ctgggctttctcgggggagtatcgtgggccatgttggtggccaggacatgccagctctac
cccaatgctgtggctgccacgcttgttcacaagttcttcttggtcttctccaaatgggaa
tggcctaatccggtgctattgaaacaacctgaagacagtaatctgaatttacctgtgtgg
gatcccagagtgaacccgtctgaccgatatcacctgatgcccatcatcacacctgcctac
cctcagcagaactccacctacaacgtctccacatcaacgcgcaccatcatgagcgaagag
ttcaaatacggtctcagcgtcacagatgagatccttcaaggcaaagcagagtggcccaag
ctcttcgagcctccgagcttcttccagaaatacaagcattacattgttctgactgcaagt
gcatcaacagaggaaaaccacctagaatgggtcggcctcgtggagtcaaagatccgggtc
ctggtggggaacctggaacggaacgagtacataactttggctcatgtcaaccctcagtcc
tttccgggttccaaagaaaaccgcagcgagaatgactttgtctgcatgtggttcattgga
atcatcttcaaaaaggtggaaaatgcagagagcgtgaacatcgacctgacgtacgacatc
cagagcttcacagacactgtttacagacaagccaacaacatcaacatgctgaaggacggc
atgaagattgaagccacgcatgtgaagaagaagcagctccaccagtatctgcctcctgag
ctggtccagaggaagaaaaggagcatagcagaggtgaaccgtggctccaacggtggaaac
ccgaagcgcttgtctttggacaacagtcacctggacagctccagagacacagactcaggg
actcccttcagttctccaaccagcaaggccctcaaacctccatcagatccagacgacggt
cccccaaagcagctggttgtggagagcccccccacacccagcgcagccgcagctgctgct
ggagacccaggcatgtcattgccggctatcggctcaaagcctccttccaagacgaagcct
ccttctccacccgccagcggcgccatcaacacagtgccgagcgcggacgtgaaccccagc
gccaccagcagccccaaagaggagcccaacggcctggaggaacccgtcaacggaggcgcc
accaagaggccgcactcccccacacaagaggacctggccaaaaagcccagaagcacagat
gttgtgtccagtgatgatgctgcatttaaagagccatatccaccatcctctgactcccat
ccagccggagacgcaccgagcacccctcctcactctggttccaaggaaaagcccattcca
accatcgatacctcaagaacacagagacttcccagcatggagctgccagacgcctcgtct
cctctccccgccagcaacagctgtcgggtcgtgaaaaactccattaagctggcgctcaac
cgccacagcatcacacccccgaagcccccgatgtttgatgacagcctctccagcgatcct
gctcctgccagcgaggagaagggaatgtccatccccgtcatcggatccaaacatgttgct
cccaaaagcgtggcgccccccgtcggcagctccatccccactttagtgagtcgagtcgtg
gaccccctaaacggggcgggatcaaaaagaccccactcaccctctctggaggagcaggcc
aagcggctgaaggaaacagagaaagccagaatccacatagcttga

  All links  
Gene (50)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (8)   
   Pfam (8)   
All databases (67)   

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