KEGG   Oryzias latipes (Japanese medaka): 101174026
Entry
101174026         CDS       T02443                                 
Symbol
ap2a1
Name
(RefSeq) AP-2 complex subunit alpha-1 isoform X1
  KO
K11824  AP-2 complex subunit alpha
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04142  Lysosome biogenesis
ola04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ola00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101174026 (ap2a1)
   04142 Lysosome biogenesis
    101174026 (ap2a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ola04131]
    101174026 (ap2a1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ola04147]
    101174026 (ap2a1)
Membrane trafficking [BR:ola04131]
 Endocytosis
  Clathrin-mediated endocytosis
   AP-2 complex
    101174026 (ap2a1)
Exosome [BR:ola04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   101174026 (ap2a1)
SSDB
Motif
Pfam: Adaptin_N Alpha_adaptin_C Alpha_adaptinC2 Cnd1 RIX1 HEAT_2 HEAT_EF3_N HEAT_GCN1 HEAT_MROH2B_1st Coatomer_g_Cpla B2-adapt-app_C
Other DBs
NCBI-GeneID: 101174026
NCBI-ProteinID: XP_023813617
UniProt: H2MRJ6
Position
8:complement(24609302..24631104)
AA seq 983 aa
MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVC
KLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDL
SSRNPTFMCLALHCIANVGSREMAEAFASEIPRILVAGDTMDSVKQSAALCLLRLYKTSP
DLVLMGEWTSRVVHLLNDQHMGVVTAAISLITCLSQKNPDEFKTCVSLAVSRLSRIVSSA
STDLQDYTYYFVPAPWLSCKLLRLLQCYPPPEDGAVKGRLVECLETILNKAQEPPKSKKV
QHSNAKNAILFEAIALIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSE
FSHEAVKTHIETVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVAEMLSYLETADYSI
REEMVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGYAA
KTVFEALQAPACHENMVKVGGYILGEFGNLIAGDPRSSPLVQFNLLHSKFHLCSVPTRAL
LLSAYIKFINLFPETKATIQEVLRCDSQIRNSDVELQQRAVEYLKLSSIASTDVLATVLE
EMPPFPERESSILAKLKKKKGPGAVSVTEMEDGKREGGELNGGGDRGPDASAMAASNAST
PSPSADLLGIRPAAPVSAAPASVGSLLVDVFSEAGPAASSAAVNDEGFLRDLEPPTETSD
SLLVEGSGDSDSAPPSEDPAPPLSEADELLNKFVCKNNGVLFENQLLQIGIKSEYRQNLG
RMYLFYGNKTSVQFASFTTTVSYPGELQSQLNVQSKPVEPLVEGGAQIQQVLNIECLTDF
SEAPLLNIKFRYGGALQNLTLKLPVTINKFFQPTEMASQDFFQRWKQLSQPQQEAQKIFK
ANNSMDTEVLKAKLLGLGMALLDNVDPNPENYVCAGVIQTKGQQVGCLLRLEPNAQAQMY
RLTLRCSKDSVSRRLCELLAEQF
NT seq 2952 nt   +upstreamnt  +downstreamnt
atgccggctgtgtcgaaaggagacggaatgcgcgggctggccgtcttcatatcggacatc
agaaactgcaaaagcaaggaggccgagataaaacgaataaacaaagagctagccaacatc
cgctcgaagtttaaaggagacaaggctctggacggctacagcaagaagaagtacgtctgc
aagctcctcttcatcttcctgctcggccatgacatcgactttggacacatggaggcagtc
aacctgctgagctccaacaagtacacagagaaacagatcggttacttgtttatctcagtg
ctggtgaacagcaacagtgagctgatccgtctgatcaacaacgcaatcaaaaatgacctg
tccagccgcaatcccaccttcatgtgcctggcgcttcactgcatcgccaacgtgggaagc
cgggagatggccgaggcctttgctagcgagattcctcgcatcctggttgctggagacaca
atggacagtgtgaaacagtctgctgccctgtgcctgcttcggctgtacaagacctctccg
gacttggtgctgatgggggagtggacctctcgtgtggtgcatctgctcaacgatcagcac
atgggagtggtgacggcagccatttctctcatcacctgtctgagtcagaagaatccagat
gagttcaagacctgcgtttccttggctgtttcccgcctcagcagaatcgtgtcgtcggcc
tccaccgacctgcaggattacacctactactttgtgccggcgccatggctgtcctgcaag
ctgctgcgcctgctgcagtgctaccctccgccagaagatggggctgttaagggccgactg
gtggagtgtctggaaaccatcctcaataaggcacaggagccccccaagtcgaagaaggtg
cagcattccaacgccaagaacgccatcctgtttgaggctatagctctcatcatccactac
gacagtgagccaaacctcctggtgcgagcttgcaaccagctgggccagttcctgcagcac
agagagaccaacctgcgctacctggcgctggagagcatgtgcactctagccagctccgag
ttctcccacgaggccgtcaagacgcacatcgagaccgtgatcaatgctcttaagactgaa
agagatgtaagcgtccggcagagagcagccgacctgctgtacgccatgtgcgaccgcagc
aacgccaagcagatcgtagcagagatgctcagctacctggagactgcagactattccatc
agagaggagatggtgctgaaggtggccatacttgcagagaagtacgctgtggactactcc
tggtatgtagacaccatcctgaacctcatccgcatcgctggggattacgtcagtgaggag
gtgtggtaccgcgtcatccagatcgtcatcaaccgagacgacgtgcaaggctacgccgcc
aagaccgtttttgaggccttgcaagcccccgcctgtcatgagaacatggtgaaggttgga
ggctacatactgggagagtttggaaacctgattgctggtgacccgcggtccagccccctg
gtccagttcaacctgctccactccaagttccacctgtgctccgtgcccactcgtgcgctg
ctgctgtcggcctacatcaagttcatcaacctgttcccagagaccaaggccaccatccag
gaggtgctgcgctgcgacagccagatccggaactcggacgtggagctgcagcagcgagcc
gtcgaatacctgaagctctcctccatcgccagcaccgacgttctggccaccgtgttggag
gagatgcctcccttcccagagagagagtcttcaatcctggccaagctgaagaagaagaag
ggccccggagcggtgtctgtgacggaaatggaggacggcaaaagggagggcggggagctg
aatggaggcggggaccgggggccggacgcatcagccatggctgcctcaaacgcttccacg
ccgtctccgtcagctgacctgcttgggattcgccccgctgcccccgtgagcgccgctcca
gccagtgtgggcagtttactggtggacgtgttttcagaggcggggcctgctgcatcctcc
gctgccgtcaacgacgaaggcttcctcagagatctggaaccgcccactgagacatctgat
tcgctattggtggagggttctggtgactctgactctgctcctccctctgaggatcctgct
cctcctctgtcagaagctgacgagctgctgaacaagtttgtgtgcaagaacaacggcgtt
ctgtttgagaaccagctgcttcagatcggcatcaagtcggagtatcgtcagaatctgggg
aggatgtacttgttctacggcaacaagacctcggtgcagtttgccagcttcaccaccacc
gtcagctatcctggagagctgcagtctcagctgaatgttcagtccaagcccgtggagccg
ctggtggaggggggggcccagatccagcaggtcctcaacatcgagtgtctgaccgacttt
tccgaggccccactgctaaacatcaagttcagatatgggggggctctgcagaacctgacc
ctcaagctgcccgtcaccatcaacaagttcttccagccgaccgagatggcgtcgcaagac
ttcttccagcgctggaaacagctcagccagcctcagcaagaagcccagaagatcttcaag
gccaacaacagcatggacacggaggttctgaaggccaagctgctgggactggggatggcc
ctgctggacaacgtggaccccaacccggagaactacgtgtgcgccggcgtgatccagacc
aagggccagcaggtgggctgcctgctgaggctggagcccaacgcacaggcgcagatgtac
cgtctgactctgcgctgcagcaaagattctgtgtcccggcgtctctgcgagctgctggca
gagcagttctga

  All links  
Gene (14)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (11)   
   Pfam (11)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system