KEGG   Oryzias melastigma (Indian medaka): 112148210
Entry
112148210         CDS       T07439                                 
Symbol
rab11fip1a
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
  KO
K12484  Rab11 family-interacting protein 1/2/5
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112148210 (rab11fip1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oml04131]
    112148210 (rab11fip1a)
Membrane trafficking [BR:oml04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    112148210 (rab11fip1a)
SSDB
Motif
Pfam: C2 RBD-FIP
Other DBs
NCBI-GeneID: 112148210
NCBI-ProteinID: XP_024130885
Ensembl: ENSOMEG00000009765
UniProt: A0A3B3BSE1
Position
LG9:complement(23158419..23172022)
AA seq 1249 aa
MSLLGQSQQFFPTSVQVTVHQARNLRVKGKNGSNDSYAIIQLAKDKFSTSVAEKSVAPVW
KEEASFDLPLFHPGNAERCTLYIIVMHRAQVGLDKFLGQAMINLLELHDDKSRKKTQWFK
LVDKNGKEDKVRGEVLLDIQFMRNNMSASMFDLSMQDKPRSRISKLKDKVRGKKKDGFSD
SASAIVPPVSQVLTDSEEDADAQSLNHSPGAKKKSKLKTLFAPKSNLQRNLSQSMSTLGT
LPEKNSSLSGSRSSGLNVDSPEGKKKFKLLGHKRTGSSDSKMSLGPFSILGRSKQNVNDQ
NNLCINGNHVYAEEPETKSGSTLSLNSSGKGSVEDIRKYTSDIPAESSKTINVPSFKPEP
INKVSLEQQRHQEEEERRQAEEKRLAEVKRLEQEEKYRAEAKRLQEEEQRKQQEEQDRRR
RVIEDEARKKKQKEEEDRRREDERNALEAAENQRLEDERRRAEERKRQEEASMSDRLSSL
FGMIRKKEEKKEDVPQQAPEEQKHTLAPHTNLAAPVHPVSHHSTNPFEETSSSSGPSAVS
TENSGNNHKFNSNPQAPSATIFLGRNAKVSAVKPRLSQSLESETSDCQTPGQLDPISVSS
ESTFNRVPAESSEAFSNLHLLLAPPKRSPSWTGSPWGSTEDLSSVELGRSSSAMADQKRK
ALLPPSYSGRRTPTEDSRTPVRDVKSPAFVEEDEPPRGNKLSLPLPDYESLFPQRRHGVQ
GQTRWDHIIAEVNQKHRDSGPELMGPEMSVDGPEEGAPSLKYRTPQENPAEKMSKTKPVS
VKKVHAPGPPKQATSSLDFNQYHRQNVAPQSVSRPNPSAVPPLRKTDSPSNRMFREGVGK
EAKASTEAAASHRPPQTQKSFDPAPADGRRTVQVPLDKDPPTAKPRQRLGTKEPTQQEQT
AVSSNIQALVTENKTTKNIAELDQLPYTQHKSIDGPGPLKMNPEDEGLFTGRQEKLEQKS
EDVMMRKDYLKDFSIENPADRIDVNDHNFESDSRNIEEQIPESLSFQRKNSQRTKKNLPV
KSPTDDKPFMSQQESASNEMTNLPSARKDFPAGDVIDGSAIPKSQYDARTQSSYYAEKDQ
YESEVFRGQSALAYSEPLPVVPEEPESQTGNLWGGKTPLRAWVSPSEAQPVSTQYSNGSG
LALTPRRPHPVKPMSSAEIQQPTITPAVKEIKVQSSVPAIMKVADSVSSGPYSQLTQEEL
ITLVVKQQADLSRKDAKISELEQYIDNLLVRVMEEKPAILYTLNSAKQA
NT seq 3750 nt   +upstreamnt  +downstreamnt
atgtctctgcttggccagagccagcagtttttccccacgagtgtccaggtaacggtgcat
caggctcggaacctccgcgtaaagggaaagaatggcagcaacgactcctatgccatcatc
cagctggccaaagacaaattttccacctcggtggcggaaaaaagcgtcgctccggtgtgg
aaggaggaggcctcgtttgacctgccacttttccacccgggaaacgccgagcgctgtact
ctgtacatcatcgtcatgcaccgagcccaggtgggactcgacaagtttctgggccaggcc
atgatcaacctgctggaactccatgacgacaagtcgcgcaaaaagacacagtggttcaaa
ttggtggacaaaaatggaaaagaggacaaggtgcgaggcgaggtgctgcttgatatccag
tttatgagaaacaacatgtcagccagcatgtttgacctttcaatgcaagacaaaccccgc
tctcgcatctccaagctgaaggacaaagtccgtgggaagaaaaaagatggcttctctgac
tctgcctcagctattgttcctcctgtcagtcaggtccttacagacagcgaggaggacgcc
gacgcacagtctcttaatcattctcccggcgccaagaagaagtccaagctcaaaaccttg
tttgcccccaagtcaaatttacagcgcaacctctcacaatccatgtctactcttgggacg
ctcccagaaaaaaattcctctctcagtggcagccgctcctctggccttaatgtagattct
cctgaaggtaaaaagaaattcaaattactgggacacaaacgaacaggaagctccgacagt
aaaatgtctctcggtcctttttccatcctgggccgctccaagcagaatgttaacgaccaa
aacaacttgtgcataaatggcaaccacgtgtacgccgaggagccagagaccaagagtggg
tctacacttagtctgaacagctctggcaaaggctctgtggaggacatccgcaaatacaca
tctgacatccctgcagaatcctccaaaaccataaacgtcccttcattcaagcctgaacca
atcaataaagtttcattagagcaacaacgccaccaagaggaggaagaaagaaggcaggca
gaggaaaagcgtcttgctgaggtgaaaagactggagcaagaggagaaatacagggcggag
gccaagagactccaggaggaagagcagcgcaagcagcaagaagagcaggacaggagaagg
cgcgtcattgaagatgaagcaaggaagaagaagcagaaggaggaggaggacaggagaaga
gaagacgaacgaaacgcgctggaagctgctgaaaaccaacggctcgaagacgagcgccga
agagcagaggagcgcaagcgccaggaggaggcctccatgagcgacaggctgtcgtcttta
ttcgggatgatccggaagaaagaggagaaaaaggaggacgtgccacagcaagctcctgag
gagcagaaacacaccctggcacctcacactaacctagcagctcccgttcatcccgtctcc
catcactccactaatccgtttgaagaaacctcctccagttcaggtccttcagctgtcagc
actgaaaattcaggcaataaccacaagttcaatagcaacccacaagccccctctgctaca
atctttctcggccggaatgctaaagtatcagccgtcaaacccagactttctcaaagtttg
gagtctgaaacctctgactgtcaaactccgggtcagcttgaccccatctcagtcagctct
gaatctactttcaatagagtcccagcggagtcctctgaagctttctccaatctacactta
ctattggctccaccaaagaggagcccaagctggactggatctccctgggggagcacggag
gatttgtcatctgttgaattgggaagatcatcgtctgctatggcagaccaaaagagaaaa
gccctgctaccaccgtcatactctggacgtaggactccgactgaggatagtcggactcct
gtcagagatgttaaaagtccagcgtttgtagaagaagatgaacctccacgaggaaataag
ttgtctttaccacttcctgattatgaaagcctctttcctcagagaagacatggtgttcaa
gggcaaactcgatgggatcatataatcgctgaggtcaaccagaaacatagggatagtgga
ccggaacttatgggtcctgaaatgagtgttgatgggccagaagaaggtgctccaagtctt
aaatatcgcacgccacaggagaatcctgctgagaagatgtccaagacgaaacctgtgtcg
gtaaaaaaagtgcacgctcctggtccaccaaaacaagccacctctagtttagacttcaat
cagtaccacagacagaatgttgccccccagtctgtatcgagacctaatccatctgcagtt
ccaccattaaggaaaacagactcccccagcaacaggatgttcagagagggagttggcaaa
gaggcaaaagcatcaactgaagctgcagcttcacaccgaccaccacagactcagaagagc
tttgatccagcaccagcagacggccgaaggactgtgcaagttcctttggataaagaccca
cccaccgctaaacccagacaaagacttggtaccaaagagcctacacagcaggaacaaact
gctgtgagcagcaacatccaagcgctcgtcacggaaaacaagacgacgaaaaacattgca
gagttggatcaacttccttatacacaacataaatccatagatggaccaggacccctaaag
atgaacccagaagatgaagggctgttcactgggaggcaggaaaaactggagcagaaatct
gaggatgtaatgatgagaaaagattatttaaaagattttagcattgaaaatcctgctgat
cgcattgacgtaaatgatcacaattttgaaagtgacagtaggaacattgaagaacaaata
ccagaaagtctctcttttcagcgaaaaaactcacaaagaacaaagaagaatcttccagtg
aaaagtcccacagacgacaaacctttcatgtctcagcaagaatcagcatctaatgagatg
acaaacttgccttcagctagaaaagacttccccgcaggagatgttattgatggttctgca
atacccaagtctcagtatgatgccagaacacaaagcagttattatgcagagaaggatcaa
tacgaaagcgaagttttccgtggacagtcagctttggcttattccgagcccctcccagtc
gtcccagaagagccagaatctcaaacaggaaatttatgggggggaaagacacccctaaga
gcgtgggtgtccccctctgaagctcagcctgtcagtactcagtatagcaatggaagcggg
ctagcgttaacccctcgcagaccacatcctgtgaagcctatgagctcagccgagatccag
caacccaccatcactcctgctgtgaaggaaataaaggtgcagagcagtgtacctgcaata
atgaaggtggctgattctgtgtcaagtggtccttacagtcagctgacacaagaggagctg
atcacactggtggtgaagcagcaggctgacctctccaggaaggatgcaaagatcagtgag
ctggagcagtatatagacaatctgcttgttcgtgtgatggaggagaaacccgctatcctg
tacaccctcaactctgccaagcaagcataa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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