KEGG T07259: 100136026

Oncorhynchus mykiss (rainbow trout): 100136026

Entry

100136026         CDS       T07259

Symbol

esr1

Name

(RefSeq) estrogen receptor

K08550

estrogen receptor alpha

Organism

omy Oncorhynchus mykiss (rainbow trout)

Pathway

omy04081

Hormone signaling

Brite

KEGG Orthology (KO) [BR:omy00001]
09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    100136026 (esr1)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:omy03000]
    100136026 (esr1)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:omy03310]
    100136026 (esr1)
Transcription factors [BR:omy03000]
Eukaryotic type
  Zinc finger
   Cys4 estrogen receptor-like
    100136026 (esr1)
Nuclear receptors [BR:omy03310]
3. Estrogen like
  3A. Estrogen receptor
   100136026 (esr1)

SSDB

Motif

Pfam:

Hormone_recep zf-C4 Oest_recep

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

Position

4:complement(24396792..24418967)

AA seq 622 aa
MLVRQSHTQISKPLGAPLRSRTTLESHVISPPKLSPQQPTTPNSNMYPEETRGGGGAAAF
NYLDGGYDYTAPAQGPAPLYYSTTPQDAHGPPSDGSMQSLGSSPTGPLVFVSSSPQLSPQ
LSPFLHPPSHHGLPSQSYYLETSSTPLYRSSVVTNQLSASEEKLCIASDRQQSYSAAGSG
VRVFEMANETRYCAVCSDFASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTMDRN
RRKSCQACRLRKCYEVGMVKGGLRKDRGGRVLRKDKRYCGPAGDREKPYGDLEHRTAPPQ
DGGRNSSSSLNGGGGWRGPRITMPPEQVLFLLQGAEPPALCSRQKVARPYTEVTMMTLLT
SMADKELVHMIAWAKKVPGFQELSLHDQVQLLESSWLEVLMIGLIWRSIHCPGKLIFAQD
LILDRSEGDCVEGMAEIFDMLLATVSRFRMLKLKPEEFVCLKAIILLNSGAFSFCSNSVE
SLHNSSAVESMLDNITDALIHHISHSGASVQQQPRRQAQLLLLLSHIRHMSNKGMEHLYS
IKCKNKVPLYDLLLEMLDGHRLQSPGKVAQAGEQTEGPSTTTTTSTGSSIGPMRGSQDTH
IRSPGSGVLQYGSPSSDQMPIP

NT seq 1869 nt +upstreamnt +downstreamnt
atgctggtcagacagtcccatacgcagatttccaaacctctcggagctcctctcagatcc
cgaacgaccctggagagccacgtcatctcccccccaaaactctcaccacagcagccgacc
acccccaacagcaacatgtaccctgaggagacacgcggaggtggtggggcggccgccttt
aactacctggatggagggtatgactacacagcccctgcccaaggcccggcccctctctat
tactccaccaccccccaggatgcccacggacccccttcggatggcagcatgcagtccctg
ggcagcagtcccaccggcccactggtgtttgtgtcctccagcccccagctcagcccccag
ctcagccccttcctccaccccccaagccaccatggtctccccagccagtcatactacctg
gagacctcgtccacacccttatataggtcgagtgtggtaaccaatcagctgtcagcgtca
gaggagaagctctgcatcgcctccgataggcagcagtcgtacagtgcagcagggtcaggg
gtcagggtgtttgagatggccaacgagacgaggtactgtgcggtctgcagcgactttgcc
tctgggtaccactacggagtttggtcctgcgagggctgcaaagccttcttcaaaaggagc
atccaaggtcacaatgactacatgtgccctgcgactaaccagtgtacaatggacaggaat
cgtaggaagagctgccaggcatgccgcctcagaaagtgttatgaagtggggatggtgaaa
ggaggcttgcgtaaggaccgcggtgggcgggttctcaggaaggataagcggtattgtggc
cctgctggtgacagagagaaaccctacggtgacctggagcacaggacagcgccccctcag
gacgggggtaggaacagcagcagcagtctcaatggtggtggaggatggcgtgggcccaga
atcaccatgcctcctgaacaggtgctgttcctgctgcagggggcagagcctccggccctg
tgttctcgtcagaaggtggcccgcccctacacagaggtcaccatgatgaccctgctcacc
agcatggctgacaaggagctggtgcacatgatcgcttgggctaagaaagtaccaggtttc
caggagctgtctctccatgaccaggtgcagctgctggagagttcctggctggaggtgctg
atgatcggactcatatggcggtccatccactgccctgggaaactcatcttcgcccaggac
ctcatactggacaggagtgaaggggactgtgtggagggtatggctgagatcttcgacatg
ctcctggccactgtgtctcgcttccgcatgcttaaactgaagcctgaggagtttgtgtgc
ctcaaagccatcatcttgctcaactctggtgccttctccttctgttccaactctgtggag
tccctccacaacagctcggcagtggaaagcatgctggacaacatcaccgacgccctcatc
caccacatcagccattcaggagcctctgtgcagcagcagcccagacggcaggcccagctc
ctgctcctgctctcacacatcagacatatgagcaacaaaggcatggagcacctttacagc
ataaaatgtaagaacaaagtgcctctgtacgacctgctcctggagatgctggacggtcac
cggctccaatccccaggcaaagtggcccaagctggggaacagaccgagggcccctctacc
accactaccacctccacaggctccagcatagggccgatgcgaggcagccaggatacccac
atcagaagccctggttccggggtactccagtatggctcccccagctcagaccagatgccc
attccgtga

All links

Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (14)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (12)   
DNA sequence (26)   
   RefSeq(nuc) (12)   
   GenBank (7)   
   EMBL (7)   
Protein domain (3)   
   Pfam (3)   
All databases (46)   

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