KEGG T07259: 110525658

Oncorhynchus mykiss (rainbow trout): 110525658

Entry

110525658         CDS       T07259

Name

(RefSeq) serine/arginine repetitive matrix protein 2 isoform X1

K12484

Rab11 family-interacting protein 1/2/5

Organism

omy Oncorhynchus mykiss (rainbow trout)

Pathway

omy04144

Endocytosis

Brite

KEGG Orthology (KO) [BR:omy00001]
09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    110525658
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110525658
Membrane trafficking [BR:omy04131]
Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    110525658

SSDB

Motif

Pfam:

C2 RBD-FIP

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

Position

6:complement(28028176..28044300)

AA seq 1672 aa
MSLADQSQQWYPTSVQVTVFQARNLRIKGKNGTNDAYAIMQVAKDKFSTSVAEKCVAPVW
KEEATFDLPLFHHGNAERCTLYIIVMHRALVGLDKLLGRAVINLLDLHDNSARKKTDWYK
LLDKNGKEDKVRGEVMMDIQFMRNNLTASMFDLSMQDKPRSRIGKLKDKVRGKKKDSFSD
SASAIVPSFSQVVTDSEGEADSHSVCPESPGAKKKSKLKSLFAPKSNLQRNVSQSMSTLG
TLPEKNASLGGSRSSGLNVDSPDVKKKFKFLGHKRTGSNDSKVSTGPFSLLGRSKQKEDP
NITCINGNHVYAEEVEPMSGSTLSLNSSGQGSVEDVRSHRQPSDAAVDSLKGAPVNSYRK
ESADRDRALLEQRRLQEEVEKRQAEEKRHNEEKQRVQLKVLQEEERKKQEEQERRFQEDE
ARRKKKQQEEEEDRKRLAEERRRLKAGELQRLGEEQRQQEEAKKAEEQKQQQEEASVTER
LSSLFGMIRKKEEKKEELQQSVANEVRPNPSPSHSTRDLEVPVPAPRHAANPFKDILLSP
DPPIPFEESPVDHQKGVCGTNTPSAAVFNSTRTAKVSAVKPRLVESLKQPETPNSDSHRQ
QSPSLSCTESPLSSVPSESPDMFSNLHSSLAPPKTQRSTSESPCSSTENLTAIGSSPIGS
ERKRQAPLPPSPMELHGNPNQGSRSVSANCGSLVSIKEVEAKRPPLPLPDYDRLFPQKRH
GVQGQTQWDHIIAEVNQRQQQYTSQLIGEEMSVDGPGLDSPAPPHNDKYLYLKERAAERF
NQQQTQVQEVQSSSWRRVGPNSLPALIPPPKPGAAAPPRLVMDSNKKQGQNTAQANPSVE
RHNAFVSKVLGSTIPMAQSSNVPSVKPWEDARKVPKTSVALASEGHSVLPIEKPTRLTLT
EVLVSSCTDERKGLPNALKEIPATKPRQRLTSKEPVRQLDPEPKAAESTTNVQQKNRSEM
RAASIDMRVSSPVMAKNTEVTANSEKQPSPDSVESDNNKKQLERFMKETFSEPDPFPIAE
VLPKYPWAQPEQSHSGDDLFSGGPQKEDKLEELGMRTDDLDKHFTPNNSTDPSSSCNDSD
SEKHPEEKPEEPSPTFQRGFSQRKKERTDFDPPAPPLTDKYSYLQERAAERLNQQQTQVQ
EVQSSSWRRVGPNSSPALIPPPKPRRLEADSNKKQSQSTAQNNPSVERHNTFVSKVLVST
NPMAQSRNVKPQEDARKVLNTSILSANDGKSVLRLEKPNRPTPQVLVSSSTDEPKGLPNT
PKEFPSAKPRQSLVRKEQADPELTSAEHATVQQENRSEMRAVSTPDIMESSPTMAKATDS
VEGDIHKKQLELIMKETFDDPFPIAEILPKDPWAQPEQSHSGDDLFSVGPQKYDKLEQRL
TTDDLVKLFVPNNPTDLFSSCNDSDSEKHPEEEKPEGPSPAFQRLFSQRKNKRAAPQPPA
NLSNKGAMGKGELLKQDPSPRENETIRLATTGSVKLEPQAKNTRQRNLYSREKVETQARK
EKWTADPFTFSRMSSDLTSPEPPQSVGEPKPQAGAEGKTLLRAWVSTSEVQPLTVLSSNG
DRPDLTPLRPHPVKPMSSMESHALINTPVVREMKTYDSSLGNMKAPGKVESGPYTQLTQE
ELITLVVKQQTELSKKDFKIIELEEYIDNLLVRVIEEKPSILQGLNSPKKAL

NT seq 5019 nt +upstreamnt +downstreamnt
atgtctttggctgaccaaagtcagcagtggtatcccacaagcgtacaggtgaccgtgttc
caagccaggaatttgaggatcaaaggaaagaatggaaccaacgatgcctatgccatcatg
caggtggccaaagacaagttttctacctcggttgccgaaaaatgtgtcgcaccggtatgg
aaggaagaggcaacgtttgacctgccactgttccaccatggcaatgctgaacgctgcaca
ctgtacatcatagtaatgcacagagctctggtgggactggacaagctcctgggacgagct
gtgatcaacctacttgatctacacgataacagcgcccgcaaaaagaccgattggtacaaa
ctgctggataagaatgggaaggaggacaaggtcagaggggaagtgatgatggacatccag
ttcatgagaaacaacttaacagccagcatgtttgacctttccatgcaagacaaaccacgc
tcccgcatcggaaagctcaaggacaaagtgcgtgggaaaaaaaaggacagcttctctgac
tcggcctctgcaatagtgccctctttcagccaggtagtcactgacagtgagggagaggct
gactcccactcagtgtgcccagagtcccctggggcaaagaaaaaatccaagctcaagtcc
ctctttgcccctaaatccaacctgcagcgcaatgtctcccagtccatgtccacactgggc
actcttcctgagaagaacgcatccctcggtggcagtcgctcttctggcctcaatgtggat
tctcctgatgttaaaaagaagttcaagttcctgggccacaagcgcacaggcagcaatgac
agcaaagtgtctacaggacctttttctcttctgggcagatccaagcagaaagaagacccg
aacatcacgtgcatcaacggcaatcatgtgtatgcagaggaggtagaacccatgtctggg
tccaccctcagccttaacagctctggtcagggctcagtggaggatgtacgaagccacagg
caaccatctgacgccgctgtagactccctcaagggcgcccctgtcaacagctacagaaag
gagtctgcagatagggatagggctctgctagagcaaaggcgccttcaggaagaggtagag
aagaggcaggctgaggagaagagacataatgaggagaaacaaagagtgcagctcaaggta
ctgcaggaggaggaacgcaagaaacaggaggagcaggagagaaggttccaggaggatgag
gcaaggaggaagaagaagcagcaggaagaggaagaggaccggaagcggctagcggaagaa
agaaggcggctgaaggcgggtgagcttcagaggctgggggaggagcagaggcagcaggag
gaggccaagaaggcagaggagcagaaacaacaacaggaggaggcctctgtgactgagagg
ctgtcctctctgtttggtatgatcaggaagaaggaggagaagaaggaagagctgcagcag
agtgtcgccaatgaggtgaggcccaacccatctcccagtcacagcaccagagatttggag
gtccctgttcctgcccctcgccatgctgccaacccattcaaggatattctcctcagtcca
gaccctccaatcccatttgaggaaagcccggtggaccaccagaagggtgtttgcggcacc
aacaccccgagcgctgcagtcttcaactccacccgcactgccaaggtgtctgcagtcaag
cccagattggtggagtctctgaagcagcctgaaacccccaactcagactcccataggcaa
caatctccctccctgtcctgcaccgaatcccctctctctagcgtcccttctgagtctcct
gatatgttctccaaccttcactcctccctggctccacctaagacacagaggagcacctct
gagtccccctgcagcagcactgagaacctgactgccataggatcttcccctatcggatct
gagaggaagcggcaagctcctctgccccccagcccaatggaactgcatggaaatcccaat
caaggctccagaagtgtgtctgctaattgtggctctcttgtgtcaattaaggaggttgag
gccaaaagacctcctctacctcttcctgactatgatcgcctgttcccacagaagaggcat
ggagtacaaggacagactcaatgggaccatatcattgcagaagtgaatcagagacagcag
caatacacatctcagctcattggcgaagagatgagtgttgatggcccaggcctcgactcc
ccagcacctccacacaatgacaaatatttgtacttgaaggagagggcagcagaacgcttt
aaccagcaacagacacaagttcaggaagttcaatcttcatcttggaggagagtggggccc
aacagtttgccagcgctcatcccccctcccaaacctggagctgcagccccccctagacta
gtgatggactcaaacaaaaagcaaggccagaacactgcacaggctaatccatctgttgaa
agacacaacgccttcgtctccaaagtcttgggctctaccattcctatggctcaaagcagc
aacgtaccctcagtgaaaccttgggaggatgcaaggaaggtgcctaaaacatcagttgct
ttagccagtgaaggccattcagttctcccaatagaaaagcctactagacttacattaaca
gaagttttagtgtcaagttgtactgatgaacgtaaaggactgccaaacgctctaaaagag
attcccgcaaccaaacccagacaaaggttaaccagcaaagagccagtgagacaattggat
cctgagccaaaagcagcagagtctactaccaatgtacagcagaagaacagatcagaaatg
agggcagcctccatagacatgagagtgagtagtccagtcatggcaaagaacactgaggta
actgctaacagtgaaaagcaaccctcacctgactctgtagaaagcgacaataacaaaaaa
caactggaacgcttcatgaaagagacattttctgaacctgacccttttcccattgcggag
gtcctgcctaaatacccatgggctcaaccagagcagagccacagtggagatgacctgttc
tctggaggaccacagaaagaggacaagcttgaagaactgggaatgagaactgatgacttg
gataaacattttacgccaaacaattcaacagatccgtcctccagctgtaatgacagtgac
tcagaaaagcatccagaggaaaaaccagaagagcccagtcctacttttcaaaggggattt
tcacaaaggaaaaaggaacgcacagacttcgaccccccagcacctccacttactgacaaa
tattcctacttgcaagagagggcagcagaacgccttaaccagcaacagacacaagttcag
gaagttcaatcttcatcttggaggagagtggggcccaacagttcaccagcgcttatcccc
cctcccaaaccccgtagactagaggccgactcaaacaaaaagcaaagccagagcactgca
cagaataatccatctgttgaaagacacaacaccttcgtctccaaagtcttagtctctaca
aatcctatggctcagagcagaaatgtgaaacctcaggaagatgcaaggaaggtgcttaac
acatctattttgtcagccaatgatggcaaatctgttctccgactagaaaagcctaataga
cctacaccacaagttttggtgtcaagttctacagatgaacctaaaggactaccaaacact
cccaaagagttcccctcagccaaacccagacaaagtttagtccgcaaagagcaagcagat
cctgagctaacatcagcagagcatgccactgtacagcaggagaacagatccgagatgagg
gcagtctcaaccccggacatcatggaaagtagtccaacgatggctaaagctactgactct
gtagaaggcgacattcacaaaaaacaactggaactcattatgaaagagacgtttgatgac
cctttccccattgctgagatcctacctaaagacccatgggcccaaccagagcagagccac
agtggcgatgacttgttctctgtaggaccacagaaatacgacaagcttgaacagagactg
acaactgacgatttggttaagctttttgtgccaaacaacccaaccgatctgttctccagt
tgtaatgacagtgactcagaaaaacatccagaggaagaaaaaccagaagggcccagtcct
gcttttcaaaggttattttctcaaaggaaaaataaacgagcagcacctcagcctccagct
aatttgagcaataaaggagccatgggaaagggtgagctgcttaaacaagacccttcaccc
agagaaaacgagacaatcaggttagccactacaggatctgtcaaacttgagccgcaagcc
aaaaatactagacagagaaatctctatagtagagaaaaggtagaaacccaagccaggaaa
gaaaagtggacagcagacccttttaccttctcccgtatgtcttctgacctgacttctcct
gagcctccccagtcagtaggtgaacccaaaccccaggcaggggctgagggtaagaccctg
ctacgggcctgggtctcaacctctgaggtgcagccactcactgttctgagtagcaatgga
gatcggccagacttaacaccactcaggcctcacccagtgaagcccatgagctccatggag
agccatgctctcatcaacaccccagtggtgagagagatgaagacctatgacagctcactg
ggaaatatgaaggcaccaggtaaggtggagagtgggccatacacccagctgacccaggag
gagctgattaccctggtggtgaagcagcagacggagctctccaagaaggacttcaagatc
attgagttggaggagtacatagacaacctgctggtgcgtgtcattgaggagaagcccagc
atcctgcaaggcctcaactctcccaagaaggccctgtaa

All links

Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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